Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_033486.1 Length=1672 Score E Sequences producing significant alignments: (Bits) Value seq615 125 7e-26 seq165 125 7e-26 >seq615 Length=258702 Score = 125 bits (138), Expect = 7e-26 Identities = 187/262 (71%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 1021 AATCCTGAAATTGGTGAAGCTTGGTCACCAGCCGAAATTGAACAAGAGTGGAATACTCGC 1080 ||||| || ||||| ||||| ||||| || ||| | ||||| || ||||| | || Sbjct 525 AATCCAGAGATTGGAGAAGCATGGTCTCCGCAAGAATTAGAACATGAATGGAACAGCCGT 584 Query 1081 TGTATTGGTTACGCACCTTCCGTTATAATTCATGATATGCAACGTGCCGTATTAGAACGT 1140 || || ||||| | || |||||| | | | | ||||||| | | | || | | | Sbjct 585 TGCATAGGTTATACCCCATCCGTTGAATTACCAGCTATGCAAATTTCAATTTTCAATCAT 644 Query 1141 GC-GCTCGTTCGCTCTG-ATAATTTTCCTTCTGATTTAAATGGTTTTCTTGTTAATGTTA 1198 || ||| || || || ||||||||||||| |||| || |||| | ||||||||| Sbjct 645 GCTGCTA--TCACTATGGATAATTTTCCTTCCGATTGTGATTGTTTATTAATTAATGTTA 702 Query 1199 GATTAATGAATAATATTCAAAAATATTTGTCCGAAATACCAAGCTTAGAGTCCGGTCCTA 1258 ||||||||||| |||||| ||||||| | ||||| |||| || ||||||| ||| | Sbjct 703 GATTAATGAATTTAGTTCAAATATATTTGACTGAAATCGCAAGTTTTGAGTCCGATCCGA 762 Query 1259 TTCCTAAGAATCTAACTGGTTC 1280 | | | ||| |||||||||| Sbjct 763 TGTCCACTAATTTAACTGGTTC 784 >seq165 Length=565763 Score = 125 bits (138), Expect = 7e-26 Identities = 187/262 (71%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 1021 AATCCTGAAATTGGTGAAGCTTGGTCACCAGCCGAAATTGAACAAGAGTGGAATACTCGC 1080 ||||| || ||||| ||||| ||||| || ||| | ||||| || ||||| | || Sbjct 8127 AATCCAGAGATTGGAGAAGCATGGTCTCCGCAAGAATTAGAACATGAATGGAACAGCCGT 8068 Query 1081 TGTATTGGTTACGCACCTTCCGTTATAATTCATGATATGCAACGTGCCGTATTAGAACGT 1140 || || ||||| | || |||||| | | | | ||||||| | | | || | | | Sbjct 8067 TGCATAGGTTATACCCCATCCGTTGAATTACCAGCTATGCAAATTTCAATTTTCAATCAT 8008 Query 1141 GC-GCTCGTTCGCTCTG-ATAATTTTCCTTCTGATTTAAATGGTTTTCTTGTTAATGTTA 1198 || ||| || || || ||||||||||||| |||| || |||| | ||||||||| Sbjct 8007 GCTGCTA--TCACTATGGATAATTTTCCTTCCGATTGTGATTGTTTATTAATTAATGTTA 7950 Query 1199 GATTAATGAATAATATTCAAAAATATTTGTCCGAAATACCAAGCTTAGAGTCCGGTCCTA 1258 ||||||||||| |||||| ||||||| | ||||| |||| || ||||||| ||| | Sbjct 7949 GATTAATGAATTTAGTTCAAATATATTTGACTGAAATCGCAAGTTTTGAGTCCGATCCGA 7890 Query 1259 TTCCTAAGAATCTAACTGGTTC 1280 | | | ||| |||||||||| Sbjct 7889 TGTCCACTAATTTAACTGGTTC 7868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5241381353208