Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1076 291 1e-76 seq26392 288 2e-75 seq186 152 8e-35 >seq1076 Length=21489 Score = 291 bits (322), Expect = 1e-76 Identities = 224/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7637 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7696 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 7697 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 7754 Query 120 CCACCAACCA-TAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | || || | |||| |||||||| | ||||||||||||||| ||||| Sbjct 7755 CCGTGGAGGGGTACCTCCACATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 7814 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7815 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 7874 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 7875 AGAAAGAGCTCTCAGTCTGTC 7895 >seq26392 Length=354 Score = 288 bits (318), Expect = 2e-75 Identities = 221/259 (85%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 344 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 285 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| | || ||| | ||||||| | || |||| Sbjct 284 CCTGTTATTGCCTCAAACTTCCATCGACTTGAATTCGATAGTCCTTTTAT--AGCCCAAA 227 Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||||| || | | | | || | | | | | |||||||||||||||||||| |||| Sbjct 226 ACCAACATAAGGTTAGCTTGCGCAAATAA--AAGCTAAGGTCTCGTTCGTTATCGCAATT 169 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 168 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 109 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 108 AAAGAGCTCTCAATCTGTC 90 >seq186 Length=247056 Score = 152 bits (168), Expect = 8e-35 Identities = 204/293 (70%), Gaps = 53/293 (18%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 |||||||||||||||| ||||||| |||||||| |||||||||||||||||| ||| ||| Sbjct 94494 CAGTGTAGCGCGCGTGTGGCCCAGGACATCTAAAGGCATCACAGACCTGTTACTGC-TCA 94436 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC------------------- 117 | ||| |||| |||||| |||||||||||||| Sbjct 94435 AT-TTCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTATATTGATAGT 94377 Query 118 ----AGCCACCAACCATAGTCGATGG----------------------GGCTATTTAGCA 151 | ||||| ||| ||||| || | ||||||| || Sbjct 94376 AAAAACCCACCGACCGAAGTCGGGGGCCTTCGAGATATCACAAGATACGTCTATTTAACA 94317 Query 152 GGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACG 211 || || |||||||||||||||||||||||||||||||||| ||| | ||| | ||||| Sbjct 94316 GGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCTTCAAACCACGAACG 94257 Query 212 GCCATGCA------CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 94256 GCCATGCAGGAACGGCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 94204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796587218046