Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq27413 102 1e-19 seq1076 102 1e-19 seq333 80.6 4e-13 seq927 77.0 5e-12 seq4247 75.2 2e-11 seq820 75.2 2e-11 seq654 75.2 2e-11 >seq27413 Length=1182 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 435 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 378 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | ||||||||| |||||||||||||||||||||||| || | Sbjct 377 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 318 Query 121 GAA 123 ||| Sbjct 317 GAA 315 >seq1076 Length=21489 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 17750 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 17693 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | | ||||||||| |||||||||||||||||||||||| || | Sbjct 17692 GGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 17633 Query 121 GAA 123 ||| Sbjct 17632 GAA 17630 Score = 75.2 bits (82), Expect = 2e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || | | | | Sbjct 3638 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCGGCCGG 3582 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 3581 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 3525 >seq333 Length=1056 Score = 80.6 bits (88), Expect = 4e-13 Identities = 91/117 (78%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || ||| | | Sbjct 143 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCAGCCGG 199 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 200 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 256 >seq927 Length=346633 Score = 77.0 bits (84), Expect = 5e-12 Identities = 88/116 (76%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| || || || | | | || Sbjct 331735 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTTGGTCGAGCGGCCGGT 331792 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 331793 GGTGCGAAGCTACCATCCGTTGGATTATGTCTGAACGCCTCTAAGGCCGGATCCAT 331848 Score = 75.2 bits (82), Expect = 2e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || | | | | Sbjct 311566 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCGGCCGG 311622 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 311623 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 311679 >seq4247 Length=2692 Score = 75.2 bits (82), Expect = 2e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || | | | | Sbjct 425 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCGGCCGG 481 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 482 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 538 >seq820 Length=70437 Score = 75.2 bits (82), Expect = 2e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || | | | | Sbjct 52991 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCGGCCGG 53047 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 53048 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 53104 >seq654 Length=62041 Score = 75.2 bits (82), Expect = 2e-11 Identities = 90/117 (77%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || | |||||| || | ||| || | | | | Sbjct 60007 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCACTCGGTC-GAGCGGCCGG 59951 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||| | ||||||||| ||||||||||||||| | | |||||| Sbjct 59950 TGGTGCGAAGCTACCATCCGTTGGATTATGCCTGAACGCCTCTAAGGCCGTATCCAT 59894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818981236224