Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1076 618 1e-174 seq186 251 2e-64 seq58 107 6e-21 >seq1076 Length=21489 Score = 618 bits (684), Expect = 1e-174 Identities = 450/513 (88%), Gaps = 13/513 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || |||||| |||| |||||||||||||||||| Sbjct 8609 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 8667 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8668 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 8727 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| Sbjct 8728 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTA 8787 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 8788 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 8847 Query 241 CA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----AAG--GG 293 || ||||| |||||| ||| |||||| |||||||| || |||| || ||| | Sbjct 8848 CAGAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAAAGCCCG 8905 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352 ||| | ||||||||||||||| || ||||||| ||||||||||||| | ||| ||||| Sbjct 8906 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 8965 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||||| |||||||||| ||||| || ||| |||||| |||| |||||||| Sbjct 8966 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGATACCATCAAACAAACTATAACTGA 9024 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471 ||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||| Sbjct 9025 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 9084 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||| Sbjct 9085 TAATCTTTGAGACAAGCATATGACTACTGGCAG 9117 >seq186 Length=247056 Score = 251 bits (278), Expect = 2e-64 Identities = 200/239 (84%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGAC-CCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | | || | ||| || ||||| ||||| | |||||||| Sbjct 93432 GTGCTCATTCCGATTACGGGGCACCGGATGAGTCCCGTATCGTTATTTTTCATCACTACC 93373 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||| ||||| |||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 93372 TCCCTGTGCCGGGAGTGGGTAATCTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGT 93313 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 93312 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACAATGGT 93253 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||| | ||||||||||| |||||||| || ||| ||||||| || | ||||||| Sbjct 93252 AGGCGCAAAACCTACCATCGACAGTTGATAAGGGAGACATTTGAAAGATGCGTCGCCGG 93194 >seq58 Length=1049717 Score = 107 bits (118), Expect = 6e-21 Identities = 117/151 (77%), Gaps = 7/151 (5%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG-TA-AGGTACTATCAAA 398 || |||||||||||||||| ||||| ||| ||| |||| ||| || || | | |||||| Sbjct 237350 TTTGCATGTATTAGCTCTAAAATTATCACAGTTGTCCAAGTAAATATAGCTGCAATCAAA 237291 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACT 456 |||| ||||| | |||||||||||||||| ||||| || | ||| | | |||| Sbjct 237290 TAAAGCGTAACTAACTTAATGAGCCATTCGCGGTTTC---GTCTTAATTCGGTGTGTACT 237234 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAG 487 || ||||||||| ||||||| |||||||| Sbjct 237233 GAGTCATGCATGGTTTAATCTCCGAGACAAG 237203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509983643136