Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq284 122 7e-23 >seq284 Length=1419496 Score = 122 bits (134), Expect = 7e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 61161 TGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 ||||||| | ||||| | | | |||| || | || || |||||| || || || || Sbjct 890026 TGACTGGAACAGTTTAACTATCAGTGAGAAAAAATTTATATCACATGTATTAGCATTTTT 890085 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGC 61279 ||| ||||| || || || |||||||| ||| | | ||||| ||| || |||||||||| Sbjct 890086 TGCTGCTTCTGATGGAATTGTCAATGAAAATCTTGTTGAACGATTTAGC-CAGGAGGTGC 890144 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 || | | ||||| ||||| || || ||||| || |||| ||||| ||||| ||||| | Sbjct 890145 AAATAACAGAGGCACGTTGCTTTTATGGCTTTCAAGTTGCAATGGAAAATGTGCACTCAG 890204 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACAT 61370 | |||||| | | | |||||||| || || Sbjct 890205 AAATGTACTCTTTGTTAATCGATACATATAT 890235 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494 ||||| ||||||| || |||||||| | | ||| ||||| ||| ||||| | Sbjct 890375 AAAGCTAATTGGGCATTAAATTGGATAAATCATGAAACTGCTACCTTTCCCGAACGTGTA 890434 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | |||||||| | || || ||| | || || ||||| ||||| || || |||||| Sbjct 890435 ATTGCATTTGCTGCAGTGGAAGGTATTTTCTTTAGTGGTAGTTTTGCTGCCATTTTTTGG 890494 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 || ||||| | ||||||||||| || || || ||||| ||||| Sbjct 890495 TTAAAGAAGAGAGGACTTATGCCAGGCCTTACATTCAGTAATGA 890538 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 || ||||| |||||| | ||||||||||| ||||| | | || |||||||| ||| | Sbjct 890757 ATTGAACAAGAATTTTTAACTGACGCTTTACCCGTTGAAATGATAGGCATGAACTGTAAA 890816 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGT 61830 || |||| || ||||||||||||||||| ||| | || | || || || ||| Sbjct 890817 CTCATGTGCCAATATATTGAATTTGTTGCGGACAGATTGCTTGTAGAATTAGGT 890870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397434432806240