Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq284 122 7e-23
>seq284
Length=1419496
Score = 122 bits (134), Expect = 7e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 61161 TGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220
||||||| | ||||| | | | |||| || | || || |||||| || || || ||
Sbjct 890026 TGACTGGAACAGTTTAACTATCAGTGAGAAAAAATTTATATCACATGTATTAGCATTTTT 890085
Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGC 61279
||| ||||| || || || |||||||| ||| | | ||||| ||| || ||||||||||
Sbjct 890086 TGCTGCTTCTGATGGAATTGTCAATGAAAATCTTGTTGAACGATTTAGC-CAGGAGGTGC 890144
Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339
|| | | ||||| ||||| || || ||||| || |||| ||||| ||||| ||||| |
Sbjct 890145 AAATAACAGAGGCACGTTGCTTTTATGGCTTTCAAGTTGCAATGGAAAATGTGCACTCAG 890204
Query 61340 AGATGTACAGTGTTCTCATCGATACGTACAT 61370
| |||||| | | | |||||||| || ||
Sbjct 890205 AAATGTACTCTTTGTTAATCGATACATATAT 890235
Score = 89.7 bits (98), Expect = 4e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
||||| ||||||| || |||||||| | | ||| ||||| ||| ||||| |
Sbjct 890375 AAAGCTAATTGGGCATTAAATTGGATAAATCATGAAACTGCTACCTTTCCCGAACGTGTA 890434
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| |||||||| | || || ||| | || || ||||| ||||| || || ||||||
Sbjct 890435 ATTGCATTTGCTGCAGTGGAAGGTATTTTCTTTAGTGGTAGTTTTGCTGCCATTTTTTGG 890494
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598
|| ||||| | ||||||||||| || || || ||||| |||||
Sbjct 890495 TTAAAGAAGAGAGGACTTATGCCAGGCCTTACATTCAGTAATGA 890538
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776
|| ||||| |||||| | ||||||||||| ||||| | | || |||||||| ||| |
Sbjct 890757 ATTGAACAAGAATTTTTAACTGACGCTTTACCCGTTGAAATGATAGGCATGAACTGTAAA 890816
Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGT 61830
|| |||| || ||||||||||||||||| ||| | || | || || || |||
Sbjct 890817 CTCATGTGCCAATATATTGAATTTGTTGCGGACAGATTGCTTGTAGAATTAGGT 890870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397434432806240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |