Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq817 84.2 7e-12 >seq817 Length=122153 Score = 84.2 bits (92), Expect = 7e-12 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 2695 AAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAA 2754 |||||||| ||||| |||||| | || ||| | || | ||| | | | || || Sbjct 101834 AAAGTTAATCAAATAGGTACTGTCACAGAATCAATTAATGCTCACAAGCTTGCTAAGAGC 101893 Query 2755 GCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCT 2814 ||||| | || | ||||| |||||||| || ||||| |||||| | || ||| Sbjct 101894 GCTGGTTGGGGCACAATGGTATCTCACCGTTCCGGAGAAACAGAAGATACGTTTATAGCT 101953 Query 2815 GATATTGCAGTTGCAACTAACG-CTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 ||| | | |||| ||| || |||||||||||||||| || || | ||| | || Sbjct 101954 GATTTAGTTGTTGGT-CTATCGACTGGTCAAATTAAGACGGGCGCACCTTGCCGTTCAGA 102012 Query 2874 CCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGA 2933 ||| | || || ||||| ||| | ||||| || ||||| || | |||| || ||| | Sbjct 102013 ACGTTTGGCCAAGTACAATCAAATTCTTCGCATTGAAGAAGAATTGGGTGCAGCTGCCAA 102072 Query 2934 ATA 2936 ||| Sbjct 102073 ATA 102075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155987321414904