Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq75 111 1e-19 >seq75 Length=5967246 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 ||||||| || || |||||||||||||| |||| |||| | || || ||||||||||| Sbjct 462539 GATGATGCAAGGATGTGTAAAATTTGTTACAATGGAGAATTAGGAGTGGTATTTTTACCA 462598 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| ||||| || || || |||||||||| || || |||| |||| |||| || Sbjct 462599 TGTGGACATATAGTTGCTTGCGTTAAATGTGCTCCTGGCATGACATCTTGTGCAGTATGC 462658 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | |||| || | |||| ||||| | ||||| ||||| Sbjct 462659 AGAGAACCTGTTACGATGACCGTACGAGCTTTCTTATCATA 462699 Score = 102 bits (112), Expect = 6e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26029 ACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCAAATGCGGGt 26088 |||||||||||||||||||| | ||| | | |||||||| | || |||| ||| Sbjct 461912 ACATTTGAAACATGGCCAAAGTCTATGCCACATACAAAAGAACAGTTGGCAGATGCAGGT 461971 Query 26089 tttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGGTTCTATAAAT 26148 || | |||| | ||||| || ||| || || |||||||| ||||| ||| | | || Sbjct 461972 TTCTATTATACTGGAAAAGGTGATCAAACTTTGTGTTATCATTGTGGAGGTGGTTTGAAA 462031 Query 26149 AATTTTGAATTACATGACGATCCATGGATACGACATGCAAAAGAATATCCAAATTGTTTA 26208 ||| ||| | | || ||||| ||| | |||||||||| | | | || |||| Sbjct 462032 GATTGGGAACCAGAAGATGATCCTTGGGAGCAACATGCAAAATGGTTTTCTAAGTGTTAT 462091 Query 26209 TATGTATTTCTTGTTAAAGGACAAGATTATATAAATAGAAT 26249 ||| || | | ||| |||| | ||||||| |||||| ||| Sbjct 462092 TATCTACTAATGGTTCAAGGTCTAGATTATGTAAATAAAAT 462132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356405021705364