Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq599 210 3e-52 seq322 188 1e-45 seq1678 187 4e-45 seq480 77.0 5e-12 >seq599 Length=727520 Score = 210 bits (232), Expect = 3e-52 Identities = 187/226 (83%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | Sbjct 647222 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 647279 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 647280 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 647339 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||||||| |||| || || || | || || ||| | | ||||||||||||||||||| Sbjct 647340 GCCCGGACCTTTCGGACAGGG-GAGA-ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 647397 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct 647398 GCCCAGAACATCTAAGGACATCACAGACCTGTTATTG-CTCAATCT 647442 >seq322 Length=437832 Score = 188 bits (208), Expect = 1e-45 Identities = 186/233 (80%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 242438 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 242381 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 242380 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 242321 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||||||| |||| || || | || | ||| | | ||||||||||||| ||||| Sbjct 242320 GCCCGGACCTTTCGGACAGGGGAGAATACAC--TGATTCCTTCAGTGTAGCGCGTGTGCG 242263 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGG 232 ||| ||||||| ||||||||||||||||||||||||| ||||| || ||||| Sbjct 242262 GCCAAGAACATATAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGG 242213 >seq1678 Length=138523 Score = 187 bits (206), Expect = 4e-45 Identities = 180/223 (81%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 121313 GTACAAAGGGCATGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 121256 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | |||||||||||| | || || | ||||| | | |||| | || Sbjct 121255 CTCGTTCATGGGGAACAATTGCAATCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 121196 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||||||| |||| || || | | || || | ||| | |||||||||||||||| Sbjct 121195 GCCCGGACCTTTCGGGCAGGGA-AGA-ACACGCTAAATCCTTCAGTGTAGCGCGCGTTTC 121138 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||||||||||||||||||| |||||||||||||||| ||||| Sbjct 121137 GCCCAGAACATCTAAGGGCAACACAGACCTGTTATTG-CTCAA 121096 >seq480 Length=671962 Score = 77.0 bits (84), Expect = 5e-12 Identities = 55/62 (89%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||| |||||||||||||||||||| |||||||||| || ||||| ||| ||| Sbjct 71381 TCAGTGTAGCACGCGTGCGGCCCAGAACATCAAAGGGCATCATTGATCTGTTGTTG-CTC 71439 Query 221 AA 222 || Sbjct 71440 AA 71441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751911356120