Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq132 141 2e-31 seq2 127 4e-27 seq732 102 1e-19 seq913 77.0 6e-12 >seq132 Length=1242231 Score = 141 bits (156), Expect = 2e-31 Identities = 186/253 (74%), Gaps = 11/253 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTAG 127 ||||||||||| ||||||||||| | |||||||| | || ||||| | | Sbjct 935929 TTTACTTTGAACAAATTAGAGTGCTTCAAGCAGGCTCTGAAAGCAGCCTGAATAGTTGTG 935988 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTA 185 ||||||||||| ||| ||||| | ||||||||||||||||||| | ||| || ||| Sbjct 935989 CATGGAATAATGGAACAGGACCTT-GGTTCTATTTTGTTGGTTT-TCGGAATCCAAGGTA 936046 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 ||||| |||| ||| || ||||| | ||||| || |||||||||||| ||||| Sbjct 936047 ATGATCAATAAGGACAGGCGGGGACATTCGTATTGCGACGTTAGAGGTGAAATTATTGGA 936106 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 | ||||| |||| |||||||| || ||||| |||| || ||| |||| ||| Sbjct 936107 TCGTCGCAAGACGCACTAGAGCGAAAGCATTTGCCAAGTATGTCTTAATTGATCA-AGAA 936165 Query 306 CGAAAGTTAGGGG 318 |||||||||| || Sbjct 936166 CGAAAGTTAGAGG 936178 >seq2 Length=2169159 Score = 127 bits (140), Expect = 4e-27 Identities = 185/254 (73%), Gaps = 13/254 (5%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAAT-TAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTA 126 ||||||||||||||| ||||||| | |||||||| | || ||||| Sbjct 678210 TTTACTTTGAAAAAAAGTAGAGTGCTTCAAGCAGGCTATGAAAGCAGCCTGAATAGTAGT 678151 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGT 184 |||||||||||| ||| ||||| | ||||||||||||||||||| | ||| || || Sbjct 678150 GCATGGAATAATGGAACAGGACCTT-GGTTCTATTTTGTTGGTTT-TCGGAATCCAAGGT 678093 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 | |||| |||| ||| | ||||||| | ||||| || || |||||||||||||| Sbjct 678092 ATTGATCAATAAGGACGG-CGGGGGTATTCGTATTGCGACGTTAGTGGTGAAATTCTTGG 678034 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || |||||| |||| ||||||| || ||||| |||| || ||| |||| || Sbjct 678033 ATCGTCGCAAGACTCACTAGAGCGAAAGTATTATCCAAGTATGTCTTAATTGATCA-AGA 677975 Query 305 ACGAAAGTTAGGGG 318 ||||||||||| || Sbjct 677974 ACGAAAGTTAGAGG 677961 >seq732 Length=320909 Score = 102 bits (112), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 10/181 (6%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT------GCTCGAATACATTAG 127 ||||||||||| ||||||||||| | |||||||| | || ||||| | Sbjct 256042 TTTACTTTGAACAAATTAGAGTGCTTCAAGCAGGCTCTGAAAGCAGCCTGAATAGTGGTG 255983 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTA 185 |||| |||||| ||| ||||| | ||||||||||||||||||| | ||| || ||| Sbjct 255982 CATGAAATAATGGAACAGGACCTT-GGTTCTATTTTGTTGGTTT-TCGGAATCCAAGGTA 255925 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 ||||| | || ||| || |||||| | ||||| || |||||||||||||||||| Sbjct 255924 ATGATCAGTAAGGACAGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGA 255865 Query 246 T 246 | Sbjct 255864 T 255864 >seq913 Length=423820 Score = 77.0 bits (84), Expect = 6e-12 Identities = 181/269 (67%), Gaps = 27/269 (10%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CT-----TTGCTCGAATACATTAG 127 ||||||||||| ||||||||||| | |||||||| || || ||||| | Sbjct 49188 TTTACTTTGAACAAATTAGAGTGCTTCAAGCAGGCTCTGAAAGCAGCCTGAATAGTGGGG 49247 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTA 185 ||||||||||| ||| ||||| | |||||| | |||||||||| | ||| || || Sbjct 49248 CATGGAATAATGGAACAGGAC-TTTGGTTCTTTCTTGTTGGTTT-TCGGAATCCAAGATA 49305 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATT--------------CAATT--GTCAG 229 ||||| ||| | | || |||||| | ||||| ||||| || || Sbjct 49306 ATGATCGATAAGAACAGGCGGGGGCATTCGTATTGCAAATATGTGTTGCAATTACGTTAG 49365 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 | ||||||| ||||||| |||| |||| ||||||| || |||| |||| Sbjct 49366 AAGTGAAATGCTTGGATCGTCGCAAGATACACTATAGCGAAAGGATTTGCCAATTATGTC 49425 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||| || | || |||| ||||| || Sbjct 49426 TTCATTTATGA-AGATCGAATGTTAGAGG 49453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915088638464