Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1066 120 1e-24 seq1041 111 7e-22 seq1730 109 2e-21 seq172 100 1e-18 seq1218 75.2 5e-11 >seq1066 Length=608094 Score = 120 bits (132), Expect = 1e-24 Identities = 95/114 (83%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| ||| |||||||||||||||||||||| ||| ||| |||| |||||| |||||| Sbjct 382267 TGGAACCAGAAAGATGGTGAACTATGCCTGTCCAGGACGAAACCAGGGGAAACCCTGGTG 382208 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 |||| || |||| ||||| ||||||||||||||||| | |||||||||||| Sbjct 382207 GAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTATAGGGG 382154 >seq1041 Length=565872 Score = 111 bits (122), Expect = 7e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 2037 CCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCCTGGTGGAGGTC 2096 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || |||| ||||| || || |||| |||||| | ||||||||||||| Sbjct 2097 CGAAGCGATTCTGACGAGCGAATCTATCGTCTGAGCTGGGTATAGGGGC 2145 >seq1730 Length=41526 Score = 109 bits (120), Expect = 2e-21 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| ||||||||||||||||||||| ||| ||| |||||||| |||||| |||||| Sbjct 10548 TGGTACCCGAAAGATGGTGAACTATTCCTAGCCAGGACGAAGCCAGGGGAAACCCTGGTG 10489 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 10488 GAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTA 10441 >seq172 Length=1265264 Score = 100 bits (110), Expect = 1e-18 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAA-ATGGGAGGTAAATTTCTTCTA 90 ||||| |||||| | || ||| | || ||| || | | ||| |||||| | | |||| Sbjct 935058 CCTTCATAGAGTCGGGCTGGTTGAAAGTGTAGCCCTTACACGGGTGGTAAACTCCATCTA 934999 Query 91 AAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGC 150 | ||||||||| | ||||||||||| | ||||||| |||| | ||| ||||||| Sbjct 934998 AGGCTAAATATAACCATGAGACCGATAGAGAACAAGTACCGTGAGGGGAAGTTGAAAAGA 934939 Query 151 ACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||||| | |||||||| || || |||||||| Sbjct 934938 ACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 934907 >seq1218 Length=585086 Score = 75.2 bits (82), Expect = 5e-11 Identities = 89/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC-AGAGGAAACTCTGGT 625 ||| |||| ||||||||||| ||||||||| ||| |||||| || ||||| | ||| Sbjct 239734 TGGTACCCAAAAGATGGTGA-CTATGCCTGGCCAGGACGAAGCCCAGGAGAAACCCAGGT 239676 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| | | | || || ||||||||| |||| ||| | |||||||||||| || Sbjct 239675 GAAGGTCCAAAAAGATTGTGACGTGCAAATTGATCATCAGAGCTGGGTATAGGGGAGA 239618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079738996400