Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq322 197 2e-48
seq1678 167 4e-39
seq249 143 4e-32
seq480 141 1e-31
seq599 114 2e-23
seq556 114 2e-23
>seq322
Length=437832
Score = 197 bits (218), Expect = 2e-48
Identities = 200/258 (78%), Gaps = 13/258 (5%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||
Sbjct 242285 TCCTTCAGTGTAGCGCGTGTGCGGCCAAGAACATATAAGGGCATCACAGACCTGTTATTG 242226
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA----GCCACCAAC 127
| |||| || | ||||| |||| ||||| ||||||| | |||||
Sbjct 242225 C-TCAATCT-CGTGGGGCTGAGAGCCGCCTGTCCCCTTAAGAAGAATAATTGTCACCAGT 242168
Query 128 C-------ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| | | | ||| ||| |||| | ||||| ||||||||||||||||
Sbjct 242167 AGGTATTTATACCGGGAGCGCCTAGTTAATAGGTCAGAGTCTCATTCGTTATCGGAATTA 242108
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
|||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 242107 ACCAAACAAATCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCGAGA 242048
Query 241 AAGAGCTATCAATCTGTC 258
|||||||||| |||||||
Sbjct 242047 AAGAGCTATCGATCTGTC 242030
>seq1678
Length=138523
Score = 167 bits (184), Expect = 4e-39
Identities = 189/254 (74%), Gaps = 36/254 (14%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 121160 TCCTTCAGTGTAGCGCGCGTTTCGCCCAGAACATCTAAGGGCAACACAGACCTGTTATTG 121101
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCAACCAT 130
| |||| || | ||| ||| | | || || |
Sbjct 121100 C-TCAA--------TGTC-----GCCGCTAGGTATTTATA-----CCGG----------- 121071
Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
|| | | ||| ||| |||| | |||||||||||||| |||||||||||||||||
Sbjct 121070 ----GA-GCGCCTAGTTAATAGGTCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAA 121016
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 121015 TCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAAAGAGCTATC 120956
Query 251 AATCTGTCCTCCCT 264
||||||| | |||
Sbjct 120955 GATCTGTCATTCCT 120942
>seq249
Length=1793701
Score = 143 bits (158), Expect = 4e-32
Identities = 97/109 (89%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 209
||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||| |||||
Sbjct 338509 CAGGTTAGAGTCTCGCTCGTTATTGGAACTAACCAGACAAATCAGTCCACCAACCAAGAA 338450
Query 210 CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||| ||||| ||||||||||||| |||||||
Sbjct 338449 CGGCCATGCACCACTACCCACTGAATCGAGAAAGAGCTATCGATCTGTC 338401
>seq480
Length=671962
Score = 141 bits (156), Expect = 1e-31
Identities = 178/240 (74%), Gaps = 17/240 (7%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||| |||||||||||||||||||| |||||||||| || ||||| |||
Sbjct 71377 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCAAAGGGCATCATTGATCTGTTGTTG 71436
Query 72 CCTCAAACTTCCATTG-GCTGGAAGCCAATAGTCCCTCT----AAGAA--------GCCA 118
| |||| | ||| |||| ||||| |||| ||| ||||| |||
Sbjct 71437 C-TCAATCA--CATGCTGCTGAGAGCCACCTGTCC-TCTTAAAAAGAATAATTGTTGCCG 71492
Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | ||| | | ||| ||| |||| | ||| | ||||||||||||||
Sbjct 71493 GTAGGTATTTATACCAGGAGCACCTAGTTACTAGGTCAGAGTCACATTCGTTATCGGAAT 71552
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 71553 TAACCAGACAAATCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAA 71612
>seq599
Length=727520
Score = 114 bits (126), Expect = 2e-23
Identities = 136/184 (74%), Gaps = 18/184 (10%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 647375 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGACATCACAGACCTGTTATTG 647434
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131
||||| | || | ||| ||| |||| ||||||| ||
Sbjct 647435 -CTCAATC-TCGTGCGCCTGAGGGCCGCCTGTCCTCTTAAGAAG---------AA----- 647478
Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
| | | ||| ||| |||| | |||||||||||||| ||||||||||||||||||
Sbjct 647479 --GGGAGCGCCTAGTTAATAGGTGAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAAT 647536
Query 192 CACT 195
||||
Sbjct 647537 CACT 647540
>seq556
Length=731664
Score = 114 bits (126), Expect = 2e-23
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210
|||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 457021 AGGTCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAGTCCACCAACTAAGAAC 457080
Query 211 GGCCATGCACCAC 223
|||||||||||||
Sbjct 457081 GGCCATGCACCAC 457093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796706075208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |