Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq322 197 2e-48 seq1678 167 4e-39 seq249 143 4e-32 seq480 141 1e-31 seq599 114 2e-23 seq556 114 2e-23 >seq322 Length=437832 Score = 197 bits (218), Expect = 2e-48 Identities = 200/258 (78%), Gaps = 13/258 (5%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| Sbjct 242285 TCCTTCAGTGTAGCGCGTGTGCGGCCAAGAACATATAAGGGCATCACAGACCTGTTATTG 242226 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA----GCCACCAAC 127 | |||| || | ||||| |||| ||||| ||||||| | ||||| Sbjct 242225 C-TCAATCT-CGTGGGGCTGAGAGCCGCCTGTCCCCTTAAGAAGAATAATTGTCACCAGT 242168 Query 128 C-------ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| | | | ||| ||| |||| | ||||| |||||||||||||||| Sbjct 242167 AGGTATTTATACCGGGAGCGCCTAGTTAATAGGTCAGAGTCTCATTCGTTATCGGAATTA 242108 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 242107 ACCAAACAAATCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCGAGA 242048 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||| ||||||| Sbjct 242047 AAGAGCTATCGATCTGTC 242030 >seq1678 Length=138523 Score = 167 bits (184), Expect = 4e-39 Identities = 189/254 (74%), Gaps = 36/254 (14%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 121160 TCCTTCAGTGTAGCGCGCGTTTCGCCCAGAACATCTAAGGGCAACACAGACCTGTTATTG 121101 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCAACCAT 130 | |||| || | ||| ||| | | || || | Sbjct 121100 C-TCAA--------TGTC-----GCCGCTAGGTATTTATA-----CCGG----------- 121071 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 || | | ||| ||| |||| | |||||||||||||| ||||||||||||||||| Sbjct 121070 ----GA-GCGCCTAGTTAATAGGTCAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAA 121016 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 121015 TCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAAAGAGCTATC 120956 Query 251 AATCTGTCCTCCCT 264 ||||||| | ||| Sbjct 120955 GATCTGTCATTCCT 120942 >seq249 Length=1793701 Score = 143 bits (158), Expect = 4e-32 Identities = 97/109 (89%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 209 ||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||| ||||| Sbjct 338509 CAGGTTAGAGTCTCGCTCGTTATTGGAACTAACCAGACAAATCAGTCCACCAACCAAGAA 338450 Query 210 CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| ||||| ||||| ||||||||||||| ||||||| Sbjct 338449 CGGCCATGCACCACTACCCACTGAATCGAGAAAGAGCTATCGATCTGTC 338401 >seq480 Length=671962 Score = 141 bits (156), Expect = 1e-31 Identities = 178/240 (74%), Gaps = 17/240 (7%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| |||||||||||||||||||| |||||||||| || ||||| ||| Sbjct 71377 TCCTTCAGTGTAGCACGCGTGCGGCCCAGAACATCAAAGGGCATCATTGATCTGTTGTTG 71436 Query 72 CCTCAAACTTCCATTG-GCTGGAAGCCAATAGTCCCTCT----AAGAA--------GCCA 118 | |||| | ||| |||| ||||| |||| ||| ||||| ||| Sbjct 71437 C-TCAATCA--CATGCTGCTGAGAGCCACCTGTCC-TCTTAAAAAGAATAATTGTTGCCG 71492 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| | | ||| ||| |||| | ||| | |||||||||||||| Sbjct 71493 GTAGGTATTTATACCAGGAGCACCTAGTTACTAGGTCAGAGTCACATTCGTTATCGGAAT 71552 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 71553 TAACCAGACAAATCAGTCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAA 71612 >seq599 Length=727520 Score = 114 bits (126), Expect = 2e-23 Identities = 136/184 (74%), Gaps = 18/184 (10%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 647375 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGACATCACAGACCTGTTATTG 647434 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 ||||| | || | ||| ||| |||| ||||||| || Sbjct 647435 -CTCAATC-TCGTGCGCCTGAGGGCCGCCTGTCCTCTTAAGAAG---------AA----- 647478 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | ||| ||| |||| | |||||||||||||| |||||||||||||||||| Sbjct 647479 --GGGAGCGCCTAGTTAATAGGTGAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAAT 647536 Query 192 CACT 195 |||| Sbjct 647537 CACT 647540 >seq556 Length=731664 Score = 114 bits (126), Expect = 2e-23 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 |||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 457021 AGGTCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAGTCCACCAACTAAGAAC 457080 Query 211 GGCCATGCACCAC 223 ||||||||||||| Sbjct 457081 GGCCATGCACCAC 457093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796706075208