Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq322 91.5 9e-17 seq1678 89.7 3e-16 seq599 82.4 5e-14 >seq322 Length=437832 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 242478 CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 242421 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 242420 TAAT-CAACGCGAGCT 242406 >seq1678 Length=138523 Score = 89.7 bits (98), Expect = 3e-16 Identities = 75/87 (86%), Gaps = 4/87 (5%) Strand=Plus/Minus Query 38 TTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAA 97 ||||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||| Sbjct 121363 TTCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA 121307 Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124 ||||| ||||||||| |||||| |||| Sbjct 121306 GGGCATGGACGTAAT-CAACGCGAGCT 121281 >seq599 Length=727520 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| || |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 647182 CTCACCAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTTTGTACAAAGGGCAGGGACG 647239 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 647240 TAAT-CAACGCGAGCT 647254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300765686240