Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_033313.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq47 77.0 4e-11 >seq47 Length=2355665 Score = 77.0 bits (84), Expect = 4e-11 Identities = 205/306 (67%), Gaps = 12/306 (4%) Strand=Plus/Plus Query 574 TACCAGATGTGGCATGTTACGCACGAGCTCAAATTTGCAGTAGAGATAAAAATAAAATTA 633 ||||||| || || || || |||||||| ||||| | | ||||| || || ||| || Sbjct 710880 TACCAGACGTAGCCTGCTATGCACGAGCACAAATATCAAAGAGAGACAAGAACAAAGTTC 710939 Query 634 GAGCTACTTGGGGTTACCCGTTGTCAGTATTTCTGACAGAAG-CTCAATATTTCTATCCT 692 | ||||| ||||| || | | | || || |||||| | || ||||| || || Sbjct 710940 GCGCTACATGGGGCTATTCTCTCACCCCATACCTAGCAGAAGGCGCATTATTT-TACCCC 710998 Query 693 ATACTGAAAGAGCTAAAACAGCGAG-ATAAGCCAAAGATAGCTTATGGAGTTGAAATTGG 751 || || | | || || || || | || |||| || || ||||| |||||| | Sbjct 710999 ATTCTTGAGAAACTCAAG-AGTGAACAAAATCCAATCATTGCATATGGCACTGAAATCGC 711057 Query 752 AACAGGAGGCATGGGCTTCTTAAACGAGATGGCGTCTTATTAT----AAAACTAACAATT 807 ||||| || ||| ||| | || || |||| | || || || |||| | || Sbjct 711058 CACAGGTGGAATGAATTTCATCAATGATATGG--TAATAGCATTTCCAACACTACCCATC 711115 Query 808 TCCTGATTGGTGATTGGAGAAAATTTGATAAGACAATTCCAGCTTGGTTAATAAGAGATG 867 | | || ||||||||| | |||||||| |||||||||||| |||| |||||| Sbjct 711116 T--TAATGGGTGATTGGTCTCGCATGGATAAGACTATTCCAGCTTGGCTAATCCGAGATG 711173 Query 868 CTTTCA 873 |||||| Sbjct 711174 CTTTCA 711179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5615273935440