Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8456 219 6e-55 seq8623 113 7e-23 >seq8456 Length=10490 Score = 219 bits (242), Expect = 6e-55 Identities = 209/258 (81%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 4097 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 4040 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 4039 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 3980 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || || ||| | | ||||||||||||||||||| Sbjct 3979 ACCCGGGCCTTTCGGCCAGGGAAA---ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 3923 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 3922 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 3866 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 3865 AGCCGCCTGTCCCTCTAA 3848 >seq8623 Length=76963 Score = 113 bits (124), Expect = 7e-23 Identities = 158/217 (73%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||||| |||||| ||||| ||||||| ||| |||||| | ||| |||||| | Sbjct 26237 GTATAAAGGGCAAAGACGTAATCAACACGAGCTT-ATGCCTCGCGTTCACTGGGAATT-C 26294 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||| | ||||||||||| | || || | || || | | |||| | || Sbjct 26295 TTCGTTCTTGGGGAACAATTGCAAGCCCCAATTCCTAGCATGAAGGAGGTTCAGCGGGTT 26354 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || | | ||| |||| || || | || |||||| | ||| | |||| |||||||||| Sbjct 26355 ACACTGGCCTTTCGGTCAGGGAAA---ACACGTTGATTCCATAAATGTACCGCGCGTGCG 26411 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 | || || ||||||| || |||||||||||| |||| Sbjct 26412 GTTCAAAATATCTAAGAGCGTCACAGACCTGTCATTG 26448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751935214495