Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8456 154 3e-35 >seq8456 Length=10490 Score = 154 bits (170), Expect = 3e-35 Identities = 179/235 (76%), Gaps = 10/235 (4%) Strand=Plus/Plus Query 91 AGAGTGTTCAAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGG 146 |||||| | ||||||||| ||| || |||||| | |||||||||||| ||||||| Sbjct 3179 AGAGTGCTTAAAGCAGGCTACCTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGG 3238 Query 147 ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGT 203 || | |||||||||||| ||||||| | ||| | ||| |||||||||||||||| || Sbjct 3239 ACCT-CGGTTCTATTTTATTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGA 3296 Query 204 CGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTA 263 ||||| | ||||| || ||||||||||||||||||| ||||| || Sbjct 3297 TGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAG 3356 Query 264 CTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| || |||| |||||||||||||||| ||||||||||||| || Sbjct 3357 AAGCGAAAGCATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 3410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915118611264