Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2440 138 5e-30 seq5145 129 2e-27 >seq2440 Length=2769 Score = 138 bits (152), Expect = 5e-30 Identities = 109/131 (83%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 |||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 754 AAGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAG 813 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||| Sbjct 814 GGGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGG 873 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 874 TATAGGGGCGA 884 >seq5145 Length=139114 Score = 129 bits (142), Expect = 2e-27 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||||| |||||||||| |||||||||||||||||||||| ||| |||| || Sbjct 17025 AAGAGCATACATGTTGGGACCTGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTTAG 16966 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||| ||| |||| | | |||| ||||| ||||||||||||||||| | |||| Sbjct 16965 GGGAAACCCTGATGGAAGTCCATAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGG 16906 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 16905 TATAGGGGCGA 16895 Score = 127 bits (140), Expect = 9e-27 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||| || |||| ||| || ||| ||||||| |||| |||||| | | ||||| ||||||| Sbjct 19080 GAGCCGGGTTGCTTGAGAGTGCTGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 19021 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 19020 AC-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 18962 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 18961 GAGAGAGTTCAAGAGTACGTGAAA 18938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079809245150