Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8456 212 1e-52 seq8623 131 3e-28 >seq8456 Length=10490 Score = 212 bits (234), Expect = 1e-52 Identities = 221/293 (75%), Gaps = 49/293 (17%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3945 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 3886 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | |||| |||||| |||||||||||||| Sbjct 3885 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 3828 Query 116 ----------CCAGCCACC--AA--------CCATAGTCGAT-------GG---GGCTAT 145 || ||| | || || | | |||| || | |||| Sbjct 3827 GTAGTAAAAACCCGCCGGCCGAAGCCGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 3769 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3768 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 3709 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3708 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 3656 >seq8623 Length=76963 Score = 131 bits (144), Expect = 3e-28 Identities = 84/92 (91%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 ||||||||| |||||||||||||||||||| | |||||||||| ||||||||||||| || Sbjct 27821 CGTTCGTTACCGGAATTAACCAGACAAATCGCCCCACCAACTAGGAACGGCCATGCATCA 27880 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||| |||||||||||| |||||||||| Sbjct 27881 CCACCCACCGAATCAAGAAAGTGCTATCAATC 27912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796731354933