Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7323 331 2e-88 seq5145 311 1e-82 >seq7323 Length=11444 Score = 331 bits (366), Expect = 2e-88 Identities = 227/254 (89%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9244 GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 9185 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | || | ||||||||||||| |||||| |||||||||||||| ||||||||||||||| Sbjct 9184 TGTTGGCGGGTGAACAATCCGACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCC 9125 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 9124 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 9065 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||| ||||||| || ||| ||| | | | |||||||||| Sbjct 9064 CCCTGTGGTAACTTTTCTGACACCTCTTGCTGAAAACTCTTCAA--GCCAAAAGGATCGA 9007 Query 267 TAGGCCACACTTTC 280 |||||| ||||| Sbjct 9006 TAGGCCGTGCTTTC 8993 >seq5145 Length=139114 Score = 311 bits (344), Expect = 1e-82 Identities = 241/283 (85%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| || | ||| |||||||||||| |||||||||||||||||| Sbjct 46858 TACTGAGCAGAATTACTATCGCAATGACTGGTCATCAGTAGAGTAAAACTAACCTGTCTC 46799 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 46798 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 46739 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct 46738 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAACGACGTCACTA 46679 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||| || | ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 46678 TGAACACT---CGGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 46622 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 46621 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 46581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854324018208