Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8456 232 1e-58 seq8623 114 2e-23 >seq8456 Length=10490 Score = 232 bits (256), Expect = 1e-58 Identities = 209/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 3844 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 3901 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 3902 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTTTT--- 3958 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 3959 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 4018 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 4019 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 4078 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 4079 ACGTCCCTGCCCTTTGTA 4096 >seq8623 Length=76963 Score = 114 bits (126), Expect = 2e-23 Identities = 154/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 |||| |||||||||||| || ||||||| || || ||||||||||| |||| | | || Sbjct 26448 CAATGACAGGTCTGTGACGCTCTTAGATATTTTGAACCGCACGCGCGGTACATTTATGGA 26389 Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGC 234 ||||| ||| || || ||| |||| | | |||| | | || ||| || ||| Sbjct 26388 ATCAACGTGTTTT---CCCTGACCGAAAGGCCAGTGTAACCCGCTGAACCTCCTTCATGC 26332 Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 | || || | | |||||||| || | | ||||| |||| || ||| | |||| | || Sbjct 26331 TAGGAATTGGGGCTTGCAATTGTTCCCCAAGAACGAAGAATTCCCAGTGAACGCGAGGCA 26272 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| || |||||||||||| |||||||| || Sbjct 26271 TAAGCTCGTGTTGATTACGTCTTTGCCCTTTATA 26238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947115765504