Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq7323 277 6e-72 seq5145 242 1e-61 seq7577 170 6e-40 seq2440 138 4e-30 seq4342 125 2e-26 >seq7323 Length=11444 Score = 277 bits (306), Expect = 6e-72 Identities = 213/250 (85%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || |||||||| ||||||| | ||||||||||||||| ||| | | ||||||| Sbjct 8712 GAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGGCGTTGTTGCCATCTCCCAC 8653 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| | ||| | | ||||||||||||||||||||||||| Sbjct 8652 TTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTC 8593 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct 8592 TTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGAAAGTAG 8533 Query 364 ATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 8532 ATAGAGACAGAAGAGAATCTCGTTAATCCATTTATGCGCGTCACTAATTAGATGACGAGA 8473 Query 423 CATTTGGCTA 432 |||||||||| Sbjct 8472 CATTTGGCTA 8463 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 8946 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 8887 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 8886 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 8827 Score = 95.1 bits (104), Expect = 4e-17 Identities = 62/68 (91%), Gaps = 3/68 (4%) Strand=Plus/Plus Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC---CTTAAGAGAGTCATAGTTA 452 |||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||| Sbjct 6660 ATGCGCATCACTAGTGAGATGACGAGGCATTTGGCTACCTTCTTAAGAGAGTCATAGTTA 6719 Query 453 CTCCCGCC 460 |||||||| Sbjct 6720 CTCCCGCC 6727 >seq5145 Length=139114 Score = 242 bits (268), Expect = 1e-61 Identities = 213/263 (81%), Gaps = 2/263 (1%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA 231 ||||||| | || |||||||| ||||||| | ||||| ||||||||| ||| | Sbjct 46314 GTTCCGCCCAAACGAGTAAGTAAAGAAACGATGAAAGTAGTAGTATTTCACCGGCGATGT 46255 Query 232 AACGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 || ||||||||||| |||||||||||| ||| | | ||| | | ||| |||||||| Sbjct 46254 TACCATCTCCCACTTATGCTACACCTCTCATGTCCTCTTACAGTGCCAGACCAGAGTCAA 46195 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||| |||||||| | || ||| ||| |||||| |||||||||||| ||||||| Sbjct 46194 TCTCAACATGGTCTTCTCTGCCTGCTAATTTTTCCAAGCGCGTTCCCTTGGCAGTGGTTT 46135 Query 351 CGCTAGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||| |||||||||||||| | |||||||||||||| |||||||||||||||||| Sbjct 46134 GGCTAGAACGTAGATAGGGACAGAAGAGAATCTCGTTAATCTATTCATGCGCGTCACTAA 46075 Query 410 TTAGATGACGAGGCATTTGGCTA 432 |||||| | |||||||||||||| Sbjct 46074 TTAGATAAAGAGGCATTTGGCTA 46052 Score = 237 bits (262), Expect = 5e-60 Identities = 204/250 (82%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || |||||||| ||||||| | ||||||||||||||| ||| | | |||| || Sbjct 25240 GAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGGCGATGTTGCCATCTCCTAC 25299 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| | ||| | | ||| ||||||| ||||| |||||| Sbjct 25300 TTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACCAGAGTCATTCTCAATAGGGTC 25359 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||| | ||| ||||| ||||||||||||| |||||||||||||| |||| Sbjct 25360 TTCTTTCCCCGTTAATTTTTCCAAGGCCGTTCCCTTGGCAGTGGTTTCGCTAGAAAGTAA 25419 Query 364 ATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||| Sbjct 25420 ATAGGGACAGAACAGAATCTCGTTAATCCATTCATCCGCGTCATTAATTAGATGAAGAGG 25479 Query 423 CATTTGGCTA 432 |||||||||| Sbjct 25480 CATTTGGCTA 25489 Score = 176 bits (194), Expect = 1e-41 Identities = 123/139 (88%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 || ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||| Sbjct 44869 AAGAGGGTCTTCTTGCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCT 44810 Query 355 AGATAGTAGATAGGGACAG-TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 || ||||| ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 44809 AGGAAGTAGGTAGGGACAGAAAGTAATCTCGTTAATCCATTCATGCGCGTCACTAATTAC 44750 Query 414 ATGACGAGGCATTTGGCTA 432 |||| |||||||||||||| Sbjct 44749 ATGAGGAGGCATTTGGCTA 44731 Score = 163 bits (180), Expect = 9e-38 Identities = 98/103 (95%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| | Sbjct 15281 CCTTAAGAGAATCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTAAATTTCTTCACGT 15340 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 15341 TGACATTCAGAACACTGGGCAGAAATCACATTGCGTCAACATC 15383 Score = 118 bits (130), Expect = 3e-24 Identities = 72/75 (96%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGT-GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 130151 AGAAGATAGGGACAGAAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 130210 Query 418 CGAGGCATTTGGCTA 432 ||||||||||||||| Sbjct 130211 CGAGGCATTTGGCTA 130225 Score = 100 bits (110), Expect = 9e-19 Identities = 96/121 (79%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 8 TTTTGCT--CTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 ||||||| |||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 46535 TTTTGCTTTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTAT 46476 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||| |||||||| ||||||||| |||| ||||| |||| || |||| || | ||||| Sbjct 46475 TCTTTGACAGATGTACCGCCCCAGTCAAA-TCCCCGCCTGGCAGTGTCCTCGAATCGGAT 46417 Query 126 C 126 | Sbjct 46416 C 46416 Score = 78.8 bits (86), Expect = 3e-12 Identities = 56/64 (88%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 393 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC---CTTAAGAGAGTCATAG 449 |||||||| ||||||| | |||||||||||||||||||||| || ||||||||||||| Sbjct 137060 TTCATGCGTGTCACTATTGAGATGACGAGGCATTTGGCTACCTACTCAAGAGAGTCATAG 137119 Query 450 TTAC 453 ||| Sbjct 137120 CTAC 137123 Score = 78.8 bits (86), Expect = 3e-12 Identities = 56/64 (88%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 393 TTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC---CTTAAGAGAGTCATAG 449 |||||||| ||||||| | |||||||||||||||||||||| || ||||||||||||| Sbjct 137126 TTCATGCGTGTCACTATTGAGATGACGAGGCATTTGGCTACCTACTCAAGAGAGTCATAG 137185 Query 450 TTAC 453 ||| Sbjct 137186 CTAC 137189 >seq7577 Length=8510 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 6956 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 7015 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 7016 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 7054 Score = 118 bits (130), Expect = 3e-24 Identities = 72/75 (96%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGT-GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2193 AGTAGATAGGGACAGAAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAACTAGATGA 2252 Query 418 CGAGGCATTTGGCTA 432 ||||||||||||||| Sbjct 2253 CGAGGCATTTGGCTA 2267 >seq2440 Length=2769 Score = 138 bits (152), Expect = 4e-30 Identities = 91/100 (91%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||| || Sbjct 2403 CTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGCTTGATTTTTTTCACGTT 2344 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||| |||||||||||||||||||||| Sbjct 2343 G--TTTCAGAGCACTGGACAGAAATCACATTGCGTCAACA 2306 >seq4342 Length=12326 Score = 125 bits (138), Expect = 2e-26 Identities = 74/76 (97%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGT-GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 636 AGTAGATAGGGACAGAAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 695 Query 418 CGAGGCATTTGGCTAC 433 |||||||||||||||| Sbjct 696 CGAGGCATTTGGCTAC 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635054581664