Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Harpegnathos_20saltator_20[refseq_20GCF_5F000147195.1_202010-09-17] 8,893 sequences; 294,465,601 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8630 141 7e-29 seq6989 96.9 3e-15 >seq8630 Length=35068 Score = 141 bits (156), Expect = 7e-29 Identities = 150/193 (78%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 61182 CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 || |||| | ||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct 13557 CGATGAAAGATATTTCATATCCCACGTGTTGGCGTTCTTTGCCGCTTCTGACGGTATCGT 13616 Query 61242 CAATGAGAAT-TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTT 61300 |||||| ||| ||||| ||| | ||| || || || | | || ||||||||||||| Sbjct 13617 CAATGAAAATCTTATT-GAAAGATTCTGCCAAGAAGTTAAGATTTCAGAGGCGCGTTGTT 13675 Query 61301 TCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA--CAGTGTTCTCAT 61358 |||| |||||||| ||||| || ||||| | || || || ||||| || || ||||| Sbjct 13676 TCTATGGCTTCCAAATTGCAATAGAGAACATTCATTCCGAAATGTATTCATTG--CTCAT 13733 Query 61359 CGATACGTACATC 61371 ||| || |||||| Sbjct 13734 CGAAACCTACATC 13746 >seq6989 Length=241196 Score = 96.9 bits (106), Expect = 3e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 ||| | |||||| | ||||| ||||||| || || ||| || ||||||||||| || Sbjct 5540 GGCGATAGATGCTAAATTGCACACAGCTACTTCTTCGGGACTGGAGTACTCGACAATCTC 5481 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 ||||||||||| ||||| || ||||||| || || ||||| || |||||||| Sbjct 5480 TGTGCACAGATTGCTGCATTTGATCGTGCCCAGATGTTGATGATTCGATTTTCGATTGCA 5421 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||| || || | ||| || || || || ||||| ||||| ||| Sbjct 5420 GTGATCTTTATAGAGCATATAAGGCGTTCCAGTCTCTACTTGCGAC 5375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397524910213520