Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20elevatus_20bari_20[genbank_20GCA_5F900068365.1_202017- 04-25] 302,727 sequences; 364,783,738 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq60 486 6e-135 seq283747 181 3e-43 >seq60 Length=9635 Score = 486 bits (538), Expect = 6e-135 Identities = 322/355 (91%), Gaps = 9/355 (3%) Strand=Plus/Minus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238 || ||||||| |||| || | |||||||| ||||| ||| ||| |||| || Sbjct 7485 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 7429 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 7428 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 7369 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 7368 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 7309 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7308 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 7249 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7248 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 7189 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 7188 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 7134 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 7719 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 7660 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||| Sbjct 7659 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 7600 >seq283747 Length=624 Score = 181 bits (200), Expect = 3e-43 Identities = 137/159 (86%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC-CAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 302 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATAAAAAACAAGCCCGTTCCCT 243 Query 339 TGGCT-GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 || | |||||||| | | | || |||||||||| ||||||||||| ||||||||| Sbjct 242 TGTTTCGTGGTTTCACAAATAAATAAGTAGGGACAGTAGGAATCTCGTTGCTCCATTCAT 183 Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 ||||||||| ||||| ||||||||||||||||||||||| Sbjct 182 GCGCGTCACCAATTAAATGACGAGGCATTTGGCTACCTT 144 Score = 75.2 bits (82), Expect = 4e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 ||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct 451 CCTTAGGACTTCTGTGTTATTTTTTAACAGAAGTGCCGCCCCAGCCAAACTCCCCA 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1630249808096