Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201
5-12-17] 164,030 sequences; 282,526,854 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq163995 199 2e-48
seq133 138 5e-30
>seq163995
Length=255
Score = 199 bits (220), Expect = 2e-48
Identities = 208/263 (79%), Gaps = 10/263 (4%)
Strand=Plus/Minus
Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 255 AAGTAGAGTGATCGAAAGATGAAAAGTACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 196
Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGC 243
||||||||||||||||||||| |||||||||| | || | || || |||| | | |
Sbjct 195 TGTTGAAAGGGAAGCGCTTGCCACCAGACTTGACGGC-GGTGTTCCGCCGGTCTTCTGAC 137
Query 244 CGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGG 302
|||| |||| | ||| | |||||||||||| || | || | |||| ||| | |
Sbjct 136 CGGTCTACTC-GCCGCGTTGCAGGCCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAG 79
Query 303 GAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACT 361
|||||| || |||| ||| ||||||||||| ||| |||| || || | || |
Sbjct 78 GAATGTAGCTCCCT--CGGGAGTGTTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC- 24
Query 362 GAGGTCCGCGCTCCGGCTAGGAT 384
|||||||||||| ||||||||||
Sbjct 23 GAGGTCCGCGCTTCGGCTAGGAT 1
>seq133
Length=8710
Score = 138 bits (152), Expect = 5e-30
Identities = 108/129 (84%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| |
Sbjct 5520 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 5579
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||||
Sbjct 5580 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 5639
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5640 TAGGGGCGA 5648
Score = 136 bits (150), Expect = 2e-29
Identities = 116/143 (81%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| |||||||
Sbjct 4702 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 4761
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| |
Sbjct 4762 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 4821
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || ||||||||
Sbjct 4822 AGAGAGTTCAAGAGTACGTGAAA 4844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076481556500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |