Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq163995 199 2e-48 seq133 138 5e-30 >seq163995 Length=255 Score = 199 bits (220), Expect = 2e-48 Identities = 208/263 (79%), Gaps = 10/263 (4%) Strand=Plus/Minus Query 124 AAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 183 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 255 AAGTAGAGTGATCGAAAGATGAAAAGTACTTTGGAAAGAGAGTTAAAAAGCACGTGAAAT 196 Query 184 TGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGC 243 ||||||||||||||||||||| |||||||||| | || | || || |||| | | | Sbjct 195 TGTTGAAAGGGAAGCGCTTGCCACCAGACTTGACGGC-GGTGTTCCGCCGGTCTTCTGAC 137 Query 244 CGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGG 302 |||| |||| | ||| | |||||||||||| || | || | |||| ||| | | Sbjct 136 CGGTCTACTC-GCCGCGTTGCAGGCCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAG 79 Query 303 GAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACT 361 |||||| || |||| ||| ||||||||||| ||| |||| || || | || | Sbjct 78 GAATGTAGCTCCCT--CGGGAGTGTTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC- 24 Query 362 GAGGTCCGCGCTCCGGCTAGGAT 384 |||||||||||| |||||||||| Sbjct 23 GAGGTCCGCGCTTCGGCTAGGAT 1 >seq133 Length=8710 Score = 138 bits (152), Expect = 5e-30 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 5520 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 5579 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 5580 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 5639 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 5640 TAGGGGCGA 5648 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 4702 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 4761 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 4762 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 4821 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 4822 AGAGAGTTCAAGAGTACGTGAAA 4844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076481556500