Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq29406 158 2e-36 >seq29406 Length=4893 Score = 158 bits (174), Expect = 2e-36 Identities = 244/340 (72%), Gaps = 14/340 (4%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | ||| ||||| Sbjct 1527 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTCAGAGCC 1585 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-G 119 | | ||||| ||||||||||||| | ||||||||| ||||| || || ||| | Sbjct 1586 TCCTTGTGGGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTCAG-CGGCACGTCG 1644 Query 120 CGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAAC-AGGGCGACG 178 ||||||||| | | || | |||||| || |||||||| |||| || | | | Sbjct 1645 CGAGGTTAACC-CGTGTGG---GGTAGCCGTAGCGAAAGCGAATACTAACTAGTGTGTTG 1700 Query 179 AGTTGGTGGCG----CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCG 234 || |||||| || ||| |||| | |||||||||||| | ||| ||||| Sbjct 1701 --TTAGTGGCGTGTCCTGGACCCGAAGCGGGGTGATCTACCCATGGCCAGTGTGAAGCGA 1758 Query 235 CGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCG 294 |||||| ||| |||||| |||||| | |||||||| | |||||| | | | Sbjct 1759 CGGTAAGACGTCGTGGAGGCGCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGTTGTG 1818 Query 295 GGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||||||||||| | |||||| || Sbjct 1819 GGTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGT 1858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972481670656