Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq29406 352 4e-95 >seq29406 Length=4893 Score = 352 bits (390), Expect = 4e-95 Identities = 230/253 (91%), Gaps = 5/253 (2%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3005 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 2946 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 2945 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATCCTCTGCGACCCACACCAGCTCC 2886 Query 121 ACACG-----TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 | || | |||||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct 2885 AGCCGAAAAAGCCTTCACCAGCACGGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTG 2826 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2825 CCGAGTTCCTTAACCACAGTTCACCCGATCGCCTTAGTATTCTCTACCTGACCACCTGTG 2766 Query 236 TCGGTTTACGGTA 248 ||||||| |||| Sbjct 2765 TCGGTTTGGGGTA 2753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694179872379