Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq29406 677 0.0 >seq29406 Length=4893 Score = 677 bits (750), Expect = 0.0 Identities = 509/592 (86%), Gaps = 16/592 (3%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||| Sbjct 2021 TCGACTACGAAGCTTA-TCCCCCGCAGTCTCACTGCCGCGCTCTCACTTACCGGCATTCG 1963 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| |||| ||| |||| | || | ||| ||| |||| ||||| ||||||||||| Sbjct 1962 GAGTTTGGCTGATGTCGCTAAGATGGTAGTCCCGCTAAACCAACCAGTAGCTCTACCTCC 1903 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1902 GGCAAGAAACACACGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGAG 1843 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 1842 TTTGATTGGCCTTTCACCCCTACCCACAACTCATCCCCTCAGTTTTCAACCTAAGTGGGT 1783 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 ||| |||||||| |||||||| ||||||| ||| |||||| |||||||| ||||| Sbjct 1782 TCGCGCCTCCACGACGTCTTACCGTCGCTTCACACTGGCCATGGGTAGATCACCCCGCTT 1723 Query 300 CGGGTCTTGATCGTGCCACTCA-TACGCCCTA-TTCGGACTCGCTTTCGCTACGGCTACC 357 |||||| | | |||||| | || | ||| || | | |||||||||||||||||||| Sbjct 1722 CGGGTCCAGGACACGCCACTAACAACACACTAGTTAGTATTCGCTTTCGCTACGGCTACC 1663 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1662 CCACACGGGTTAACCTCGCGACGTGCCGCTGACTCGCAGGCTCATTCTTCAAAAGGCACG 1603 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 || |||| || | |||| |||| ||||||||||||||||| |||||||| Sbjct 1602 CCATCAC------CCCACAAGG-----AGGCTCTGACGGATTGTAGGCACACGGTTTCAG 1554 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||| ||||||||||||||| |||||| Sbjct 1553 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCATTCCCTCACGGTACTAATCCGCT 1494 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 |||||||| ||| |||||| ||||||| |||||||||||| |||||||||| Sbjct 1493 ATCGGTCA-CAACAAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACA 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817005226752