Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq29406 161 2e-37 seq112 80.6 7e-13 >seq29406 Length=4893 Score = 161 bits (178), Expect = 2e-37 Identities = 264/365 (72%), Gaps = 13/365 (4%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 |||||||| ||| |||||| |||||| || ||||| ||| || ||| || Sbjct 1800 TTTTCAACCTAAGTGGGTTCGCGCCTCCACGACGTC-TTACCGTCGCTT-CACACTGGCC 1743 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAG--ACGCCCTAGTAAG 147 || || |||||| ||| | || |||||| | | | || |||| || | ||||| || Sbjct 1742 ATGGG-TAGATCACCCCGCTT-CGGGTCCAGGACAC-GCCACTAACAACACACTAGTTAG 1686 Query 148 -ACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCAC-TGAAAATAAGTCG 205 | ||||||| ||||||| || ||| | ||| | | | | || || || | | ||| Sbjct 1685 TATTCGCTTT-CGCTACGGCTACCCCACACGGGTTAACCTCGCGACGTGCCGCTGACTCG 1627 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 | | | |||| | ||||||| |||| |||||| |||| | || ||| || | ||||| Sbjct 1626 CAGGCTCATTCTTCAAAAGGCACGCCATCACCCCACAAGGAGG-CTCTGACGGATTGTAG 1568 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 ||| ||||||||||| |||||||||||||||| ||||||| |||||| || |||||||| Sbjct 1567 GCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCATTCCCTCA 1509 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 |||||||| | | |||||||||| | |||||| || ||| || ||||||| || Sbjct 1508 CGGTACTAATCCGCTATCGGTCA-CAACAAGTATTCAGGCTTACCGGGTGGTCCCGGCAG 1450 Query 386 ATTCA 390 ||||| Sbjct 1449 ATTCA 1445 >seq112 Length=7196 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 4830 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 4772 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 4771 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 4731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241193711232