Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq29406 419 5e-115 >seq29406 Length=4893 Score = 419 bits (464), Expect = 5e-115 Identities = 340/408 (83%), Gaps = 9/408 (2%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| Sbjct 2425 CGACTACGCCTGTCGGCCTCGCCTTAGGCCCCGACTCACCCTGGGAAGATTAACTTGACC 2366 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | ||||||||||| | ||||||| | | ||| ||| | ||| ||||||||||||||| Sbjct 2365 CAGGAACCCTTGGTCATCCGGCGGATGAGGTTCTCACTCATCATTCGCTACTCATGCCTG 2306 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 ||||||||||||||| |||| ||| ||||||| ||| |||||| ||||||| Sbjct 2305 CATTCTCACTCGCATAGCGTCCAGCACTGGGTCACCCCGCACCTTCACTCGCCACACGAC 2246 Query 181 GCTCCCCTACCCAACCACACAG----GT---TGCCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||||||| | ||||||| || | || | |||||||||| |||| |||| Sbjct 2245 GCTCCCCTACCAACCCACACAACAGTGTGAGTTCCGCGGCTTCGGCGGTGTACTTGAGCC 2186 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 || ||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||| Sbjct 2185 CCACTACATTGTCGGCGCAGAACCACTCGACCAGTGAGCTATTACGCACTCTTTCAAGGA 2126 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| ||||||||||||||| ||||| ||| | ||||||||||| ||||| || Sbjct 2125 TGGCTGCTTCTAAGCCAACCTCCTGGCTGTCTTCGCGATCCCACATCCTTTTCCACTTAG 2066 Query 354 T-CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | |||| ||||||||||||||| | |||||||||||||||||||||| Sbjct 2065 TACACC-CTTAGGGGCCTTAGCCGGCGATCTGGGCTGTTTCCCTCTCG 2019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177214653952