Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq29406 300 2e-79 >seq29406 Length=4893 Score = 300 bits (332), Expect = 2e-79 Identities = 228/268 (85%), Gaps = 1/268 (0%) Strand=Plus/Minus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| |||||||| ||| || |||| ||||| |||| Sbjct 3921 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTCCCATACGTAGCCAACCAGCCATGC 3862 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 ||| |||||||| |||||||||| |||||| |||||||||||||||||| || Sbjct 3861 CACGGGCGTGACAACTGGCCCACCAGAGGTATGTCCAACCCGGTCCTCTCGTACTAGGGT 3802 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 |||| |||||| |||| |||| |||| ||||||| |||||||||||||| ||||||| Sbjct 3801 CAGCCTTTCTCAAGTTTCA-ACGCGCACGGCGGATAGAGACCGAACTGTCTCACGACGTT 3743 Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 || ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | Sbjct 3742 CTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCAACTCC 3683 Query 248 AGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||| ||||||||||||||| Sbjct 3682 AGCCCCAGGATGCGACGAGCCGACATCG 3655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780552483228