Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq29406 244 4e-62 >seq29406 Length=4893 Score = 244 bits (270), Expect = 4e-62 Identities = 329/449 (73%), Gaps = 8/449 (2%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | ||||||||||||||||||| ||||| |||||| ||| | ||||| Sbjct 1717 GACCCGAAGCGGGGTGATCTACCCATGGCCAGTGTGAAGCGACGGTAAGACGTCGTGGAG 1776 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | |||||||||| | |||||||| | |||||||||| |||||||||||||||||||| | Sbjct 1777 GCGCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGTTGTGGGTAGGGGTGAAAGGCCA 1836 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | |||||| | ||||||||||||| |||||| |||||||| || || || | Sbjct 1837 ATCAAACTCCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGGTGCAGCGTCGTGTGTTT 1896 Query 215 C-CATCGGGGGTAGAGC-ACTGTTATGGCTAGGGGGTCATTGCGACTTA-CCAAACCATT 271 | ||| |||||||| |||| | | ||| ||| | | | |||| | | | || Sbjct 1897 CTTGCCGGAGGTAGAGCTACTGGTTGGTTTAGCGGGAC-TACCATCTTAGCGACATCA-G 1954 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCG 331 |||||||||||||| | ||| | ||||| |||||| ||| | |||| | || Sbjct 1955 CCAAACTCCGAATGCCGGTAAGTGAGAGCGCGGCAGTGAGACTGCGGGGGATAAGCTTCG 2014 Query 332 TGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAA 391 | ||||||| || | || || | ||||||||||| || | |||||| | Sbjct 2015 TAGTCGAGAGGGAAACAGCCCAGATCGCCGGCTAAGGCCCCTAAGGGTGTACTAAGTGGA 2074 Query 392 ACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTT 451 | || || || ||| || |||||||| |||| |||||||| |||||||||| || || Sbjct 2075 A--AAGGATGTGGGATCGCGAAGACAGCCAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTG 2131 Query 452 AAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||||||| |||||||| |||||| Sbjct 2132 AAAGAGTGCGTAATAGCTCACTGGTCGAG 2160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689047112192