Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq170 214 3e-53 >seq170 Length=9931 Score = 214 bits (236), Expect = 3e-53 Identities = 215/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 5191 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 5132 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------C 116 | |||| || | |||| |||| | |||||||||||||| | Sbjct 5131 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGC 5074 Query 117 CAGCCAC-----CAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 ||| | | ||| ||||| ||| | |||||||||||| || Sbjct 5073 CAGTGAGTTGCGCGACCGAAGTCGCGCACACCTAAATGACGACGCCTATTTAGCAGGCTA 5014 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 5013 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 4954 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 4953 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 4912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794387634963