Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecuba_20flava_20[genbank_20GCA_5F900068455.1_202017- 04-25] 312,523 sequences; 212,767,244 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq170 414 3e-113 >seq170 Length=9931 Score = 414 bits (458), Expect = 3e-113 Identities = 412/529 (78%), Gaps = 26/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || || | |||||| || ||||| ||||| | ||||||||| Sbjct 4149 GTACTCATTCCGATTACGAGGCCTCGAAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 4090 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4089 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4030 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 4029 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGT 3970 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || | | ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 3969 AGTCGCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 3910 Query 240 TCAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACC------AAGGA-----GCCCC 287 | | ||||||||| | ||||||| || ||| | || || | | | Sbjct 3909 ACTTGACCATGCGATCGGCAAAAGTTATCCAGATTCATCAAAATTAACGACTTCGGACGC 3850 Query 288 GAAG------GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGG 337 |||| | || | | |||| |||||||||| ||| ||| || ||| | | Sbjct 3849 GAAGCCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGAG 3790 Query 338 TTTT--TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 || | | |||||||||||||||||||||||||| |||||||| ||| ||| ||| Sbjct 3789 TTCTGATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACCGAGTAAGATC 3730 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| | ||||||| || |||||||||||| || || | || | | |||| || Sbjct 3729 TAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCAC 3671 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3670 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 3622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505679652608