Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq24004 120 2e-22 seq32346 111 1e-19 >seq24004 Length=11461 Score = 120 bits (132), Expect = 2e-22 Identities = 881/1415 (62%), Gaps = 48/1415 (3%) Strand=Plus/Minus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || || || || || | ||||||||| |||||||||||||| |||||||| |||||||| Sbjct 9618 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 9559 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581 ||||| ||||| ||||| | ||| | || || ||||| || | || | || || | Sbjct 9558 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCT 9499 Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641 | | |||||| ||| | ||| | | | || | | ||||||||| | Sbjct 9498 TTAAGGACAGCCCAGTCCCAAA--GGTCTGTAG--GAGTT--TTGTCCCACATATCATAC 9445 Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701 || ||| | || || || || || | | | ||| | || || | | Sbjct 9444 TGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCA 9385 Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761 || | || ||| || | || | ||| || ||||||| || || || || || |||| Sbjct 9384 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTG 9325 Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821 || ||| | || || ||||| | || | ||||| ||||| | || |||| Sbjct 9324 AGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATG 9265 Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881 || ||||| |||||||| || || | ||| | || ||| ||| | | || ||||| ||| Sbjct 9264 CCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACA 9205 Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941 || || |||| | ||| |||| || ||||| | || || | | ||| | Sbjct 9204 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCT 9145 Query 65942 CGCAATTGTTCGAAATCAAA-ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTT 66000 |||| || |||| ||| |||| || | |||||| | Sbjct 9144 TTTAATTTTTTAAAATTAAATCTGTT-------AT------------TTTCAACAAACAT 9104 Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 | ||| || | || || |||||||| || || | || || | || || | || Sbjct 9103 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 9044 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCG 66120 || || ||||| ||||| || || || ||||| | ||| | |||||||||||| | Sbjct 9043 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 8984 Query 66121 ATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || || |||||||| |||| |||||| || || || ||||| ||||||| || || || Sbjct 8983 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 8924 Query 66181 GGCGTGCCAAA------GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTC 66234 | | ||| | |||| | || ||| || | || ||| ||| Sbjct 8923 TGACTTCCATAACTCTTGAGCTC-TGACTT-GTTTTATAAATCG-------TTTTTCTTC 8873 Query 66235 GTAATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 | || || | || || | || || || || | || | || | ||||| Sbjct 8872 TTCATATTTGGCATATAGTTCGTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACA 8813 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | || |||||||| || |||| | |||||| |||||| | |||||| ||||| Sbjct 8812 ATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTCATAAACAGATC 8753 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410 |||||||| | || || || || || | |||| || || | || ||| || | Sbjct 8752 TGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCT 8694 Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470 | || || | ||| ||||| || || |||||||| || || | || || || || | Sbjct 8693 TCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATG 8634 Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530 ||| ||||||| |||||||| || || || | || |||||| | || | || Sbjct 8633 CGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCA 8574 Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCC 66590 |||| || || || || || || ||||| ||||| | ||| || || | || | Sbjct 8573 ACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTC 8514 Query 66591 GTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGG 66650 || || || | ||| || ||||| || | || || || ||||| | Sbjct 8513 TGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTT 8454 Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710 | || || || || |||||| || | || || | | ||| | || || Sbjct 8453 TTAAAGTATCAAAGATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGG 8394 Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770 ||| || || |||||||| || ||||| || || || | || || ||||| || | Sbjct 8393 AAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATT 8334 Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830 ||||| ||| || || | ||| || |||||||| ||| |||||||| || | Sbjct 8333 TCTCTGACATCATATTATAAGTTTTGATTGCACTATCAATGTCTTCACCATGAATGCCTA 8274 Query 66831 GTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864 || | | || ||| || | || |||||||| ||| Sbjct 8273 -TGGAGACTCTCATAAGCATGTGTTGAGGCCTTTC 8240 >seq32346 Length=5591 Score = 111 bits (122), Expect = 1e-19 Identities = 170/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || |||||||| || || || |||| || ||| ||| || || ||||| || | Sbjct 3201 TTATTCAATGCAATTGAAACTCTACCATGTGTTAAGAAGAAGGCAGACTGGGCGTTACAG 3142 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||||| ||| | || ||||||||||| ||||| | | || ||||| | || ||| Sbjct 3141 TGGATCGGCAGCAAGACAGCTACATTTGGAGAACGTATAATTGCTTTTGCAGCAGTTGAG 3082 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||||||| || ||||| |||| ||||||||||| ||||| || || ||| Sbjct 3081 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 3022 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 ||||| |||| ||||| ||||| | || || | || || || ||| | || ||||| Sbjct 3021 CCCGGATTGACTTTCAGTAATGAACTTATTTCTAGGGATGA-GGTATGTTTCGTAATTTT 2963 Query 61636 G 61636 | Sbjct 2962 G 2962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396416674628960