Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq142030 196 2e-47 seq269857 190 8e-46 seq176 138 5e-30 seq218963 122 4e-25 >seq142030 Length=677 Score = 196 bits (216), Expect = 2e-47 Identities = 143/166 (86%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||||||||||||||||||||||||||| |||| |||| | | |||||||| Sbjct 477 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAGACACCATCTAAAGC 536 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 537 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 596 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 || |||||| || ||| || ||||||||||||| | | ||||| || Sbjct 597 TGAAAAGAGGGTGAAATAGTACGTGAAATTGTTAATATGGAAGGGC 642 >seq269857 Length=342 Score = 190 bits (210), Expect = 8e-46 Identities = 171/211 (81%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 353 GCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 ||| ||| ||||||| || || | ||||||||||| |||||| || || | ||||| Sbjct 135 GCCGGGATTGAGGTCAGC-CTTTG--TAGGATGCTGGGGTAATGATTTTATACCACCCGT 191 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||| |||||| ||||||||||||| |||||||| | Sbjct 192 CTTGAAACACGGACCAAGGAGTCTATTGCCTATGCAAGTGTTTGGGTGTAAAACCCGTAC 251 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGAT 532 ||| |||||||||||||| |||| | |||| |||||||| |||| |||||| ||| Sbjct 252 GCGAAATGAAAGTGAACGTAGGTTAGGGCCCGCAAGGGTGCATAATCGGCCGATCTTGAC 311 Query 533 GTCTT-CGGATGGATTTGAGTAAGAGCATAG 562 || || | |||||||||||| |||||||||| Sbjct 312 GTTTTACAGATGGATTTGAGCAAGAGCATAG 342 >seq176 Length=9840 Score = 138 bits (152), Expect = 5e-30 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 1768 GAGCACAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 1709 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 1708 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 1649 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 1648 TAGGGGCGA 1640 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 2586 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 2527 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 2526 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 2467 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 2466 AGAGAGTTCAAGAGTACGTGAAA 2444 >seq218963 Length=212 Score = 122 bits (134), Expect = 4e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||| |||||||| ||||||| |||||| | | ||||| ||||||| Sbjct 100 GAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGTGGTAAACTCCATCTAAGGCTAAAT 41 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGA 134 |||||| |||||||||||||| ||||||| |||| Sbjct 40 ATTGGCGAGAGACCGATAGCGAACAAGTACCGTGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073076497700