Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq176 223 7e-56 seq288334 212 1e-52 >seq176 Length=9840 Score = 223 bits (246), Expect = 7e-56 Identities = 207/258 (80%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || || | ||||| || | ||||| |||||||||||||||| Sbjct 4845 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 4788 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || | |||| Sbjct 4787 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 4731 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| ||| | ||| || | | |||||| ||||||||||||| | | ||| Sbjct 4730 CCCTGGCCTAGAGGCCCGGGCAACCCGTTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 4671 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 4670 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 4611 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 4610 ACGTCCCTGCCCTTTGTA 4593 >seq288334 Length=463 Score = 212 bits (234), Expect = 1e-52 Identities = 148/167 (89%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 150 GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209 |||||||||||||||||||||| || ||| ||||||||| |||| ||| |||| ||| Sbjct 1 GCCGCACGCGCGCTACACTGACCGATCCAGCGAGTTCATT-CCTTATCCGAAAGGATTGG 59 Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 60 GTAATCTTGTGAAACTCGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 119 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 |||||| ||| ||||||| ||||||||||| ||||||| ||||||| Sbjct 120 AGGAATACCTTGTAAGCGTATGTCATCAGCATGCGTTGAATACGTCC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944142684672