Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq290896 297 6e-78 seq176 291 3e-76 seq28938 89.7 2e-15 seq277040 82.4 2e-13 >seq290896 Length=230 Score = 297 bits (328), Expect = 6e-78 Identities = 199/222 (90%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 9 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATT 68 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 69 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 128 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||||||||||||||||| || | || |||| ||||| |||| ||||||||||||| Sbjct 129 AGCCCGCGAAGGACCTTAATGCTAAAAGATGGGACGTGAATCCCAGCTCCGCTTCATTGA 188 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC 228 |||||||||| ||||||| |||||||||||||||| |||| Sbjct 189 ATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCACCGGCGC 230 >seq176 Length=9840 Score = 291 bits (322), Expect = 3e-76 Identities = 166/169 (98%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 60 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 61 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTT 120 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 169 Score = 210 bits (232), Expect = 7e-52 Identities = 164/194 (85%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238 || ||||||| |||| || | |||||||| ||||| ||| ||| |||| || Sbjct 9650 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 9706 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 9707 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 9766 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 9767 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 9826 Query 359 AGTAGATAGGGACA 372 |||||||||||||| Sbjct 9827 AGTAGATAGGGACA 9840 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 9416 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 9475 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | ||||||| Sbjct 9476 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAACCGGATC 9535 >seq28938 Length=1568 Score = 89.7 bits (98), Expect = 2e-15 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||| |||||||||| |||||||| ||||||||||| | | |||||||||| ||||||| Sbjct 744 AGTAAATAGGGACAGCGGGAATCTTGTTAATCCATTAACGTGCGTCACTAAAAAGATGAC 685 Query 419 GAGGCATTTGGCTA 432 |||| ||| ||||| Sbjct 684 GAGGTATTCGGCTA 671 >seq277040 Length=126 Score = 82.4 bits (90), Expect = 2e-13 Identities = 66/79 (84%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235 |||| || ||| |||||||| |||| | | |||||||||||||||| |||||||| Sbjct 76 CGCTGCACTGAATAAGTAAAGAAACATTGAAGGTAGTGGTATTTCACCGGCGCCGAA--- 20 Query 236 GCTCCCACTTATTCTACAC 254 ||||||||||||||||||| Sbjct 19 GCTCCCACTTATTCTACAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1629921999552