Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq304930 116 6e-24 seq86710 102 1e-19 seq176 78.8 2e-12 >seq304930 Length=482 Score = 116 bits (128), Expect = 6e-24 Identities = 101/123 (82%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | ||| | |||||||| |||||| ||||| || | || | Sbjct 417 GTACGAGAGGAACCGTTCA-TTC-GCGTAATTGGTATTTGCGCCTGTCCGATAGGACAAT 360 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| | Sbjct 359 GGCGCGAAGCTACCACGCGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 300 Query 121 GAA 123 ||| Sbjct 299 GAA 297 >seq86710 Length=144 Score = 102 bits (112), Expect = 1e-19 Identities = 83/98 (85%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||||| |||||||||| |||||||| || | |||| | Sbjct 49 GTACGAGAGGAACAGTATA-TTCAGG-TAATTGGTTTATGCGGCTGCTCGATCGGGCAAT 106 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 ||||||||||||||| |||||||||||||||||||||| Sbjct 107 GCCGCGAAGCTACCACCTGCTGGATTATGGCTGAACGC 144 >seq176 Length=9840 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 9092 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 9035 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 9034 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 8980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816638465536