Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5177 168 5e-37 seq197295 143 2e-29 seq213871 116 3e-21 >seq5177 Length=4331 Score = 168 bits (186), Expect = 5e-37 Identities = 890/1412 (63%), Gaps = 42/1412 (3%) Strand=Plus/Minus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || || || || || | |||||||| |||||||||||||| |||||||| |||||||| Sbjct 3379 TAAATATTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 3320 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581 ||||| ||||| || || | ||| | || || ||||| || | || | || || | Sbjct 3319 GCAGTCGGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCT 3260 Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641 | | |||||| ||| | ||| | | | | | | ||||||||| | Sbjct 3259 TTGAGGACAGCCCAGTCCCAAA--GGTCTGTAGGAGTTTT----GTTCCACATATCATAC 3206 Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701 || ||| | || || || || || | | | ||| | || || | | Sbjct 3205 TGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCACCTTCTTTTTCT 3146 Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761 || | || ||| || | || | ||| || ||||||| || || || || || ||||| Sbjct 3145 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTA 3086 Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821 || ||| | || || ||||| || || | ||||| ||||| || || |||| | Sbjct 3085 AGGAGTATTGCTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATA 3026 Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881 || ||||| ||||||||||| ||||| || | || ||| ||| | | || ||||| ||| Sbjct 3025 CCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACA 2966 Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941 || || | || | ||| || | || ||||| | ||||| | | ||| | Sbjct 2965 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCT 2906 Query 65942 CGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTG 66001 |||| || ||| | |||| |||| | | | |||||| || Sbjct 2905 TTTAATT-TTTTAAAACTAAAT--------CGAT---TATT------TTCAACAAACATG 2864 Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 ||| || | || || |||||||| || || | || || | || || | ||| Sbjct 2863 TTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACA 2804 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 | || ||||| ||||| || || || ||||| | ||| | |||||||||||| | Sbjct 2803 ACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTG 2744 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| |||||||| |||| ||| || || || || ||||| ||||| | || || || Sbjct 2743 TTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATA 2684 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCAC-CG---TACGTACCGCCCTACCTTTGCGTTCGTA 66237 | | ||| | | | || | || || || |||| ||| ||| | Sbjct 2683 GACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAACCG-------TTTTTCTTCTTC 2631 Query 66238 ATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294 || || | || ||| |||||| || || | || | || | ||||| | Sbjct 2630 ATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGGCCAGGACAATC 2571 Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354 || |||||||| || |||||| |||||| |||||| | |||||| ||||| || Sbjct 2570 ATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGG 2511 Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGC 66413 |||||| | || || || || || | |||| || || | || ||| || || Sbjct 2510 TATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTTT 2452 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 || || | ||||||||| ||||| |||||||| || || | ||| || || || | | Sbjct 2451 TTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTGCAAATGCAC 2392 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | ||||||| |||||||| || || || | || ||||||| | || | ||||| Sbjct 2391 CGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACA 2332 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || || || || || ||||| ||||| | || || || | || | | Sbjct 2331 TTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCCTGGGCTCTAA 2272 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCA 66653 | || || | ||| || |||||||| | || || || ||||| | | Sbjct 2271 TGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATGCACATTGTTTTA 2212 Query 66654 CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAA 66713 || ||| || || |||||| || | || || | | ||| |||| || || Sbjct 2211 AAGTATCGAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAA 2152 Query 66714 GTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGC 66773 | || || ||||| || || ||||| || || || | || || ||||| || | Sbjct 2151 GCTGTGGCCGCGGTGTAGCAGCTGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCT 2092 Query 66774 GAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG 66833 ||||| ||| || || | ||| || |||||||| ||| ||||||||||| | || Sbjct 2091 CTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTA-TG 2033 Query 66834 CACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864 | | || ||| || | || |||||| | ||| Sbjct 2032 GAGACTCTCATAAGCATGTGTTGAGGTCTTTC 2001 >seq197295 Length=1118 Score = 143 bits (158), Expect = 2e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 61190 AACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGA 61249 ||||||| || |||||||| || || |||||||| ||||| || ||||| || ||||||| Sbjct 550 AACATTTTATCAAACATGTCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGA 609 Query 61250 ATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCT 61309 | || |||| |||||| |||| ||||| |||||| | || || | || ||||| || | Sbjct 610 ACTTGGTGGAGCGTTTCTCGCAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTT 669 Query 61310 TCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACA 61369 | || ||||| ||||| ||||| || |||||||||||| | | | || || || || | Sbjct 670 TTCAAATTGCTATGGAAAATGTTCATTCGGAGATGTACTCTTTATTAATTGACACTTATA 729 Query 61370 TCAGGGA 61376 | ||||| Sbjct 730 TAAGGGA 736 >seq213871 Length=423 Score = 116 bits (128), Expect = 3e-21 Identities = 171/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 ||||||||||| || ||||| |||| | ||| ||| || || ||||| || | Sbjct 132 TTGTTCAATGCAATTGAGACTCTACCATGTATTAAGAAGAAGGCAGACTGGGCGTTACAG 191 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||||| ||| | || || |||||||| ||||| | | || ||||||| ||| ||| Sbjct 192 TGGATCGGCAGCAAGACTGCCACATTTGGAGAACGTATTATCGCTTTTGCGGCGGTTGAG 251 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||||||| || ||||| |||| ||||||||||| ||||| || | ||| Sbjct 252 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGCTTGATG 311 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 ||||| | || ||||||||||| | || || | || || || ||| | || ||||| Sbjct 312 CCCGGATTAACTTTCAGCAATGAACTTATTTCTAGGGATGA-GGTATGATTAGTAATTTT 370 Query 61636 G 61636 | Sbjct 371 G 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396004043771360