Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 168 5e-37
seq197295 143 2e-29
seq213871 116 3e-21
>seq5177
Length=4331
Score = 168 bits (186), Expect = 5e-37
Identities = 890/1412 (63%), Gaps = 42/1412 (3%)
Strand=Plus/Minus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| || || || || | |||||||| |||||||||||||| |||||||| ||||||||
Sbjct 3379 TAAATATTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 3320
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||| ||||| || || | ||| | || || ||||| || | || | || || |
Sbjct 3319 GCAGTCGGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCT 3260
Query 65582 CGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGT 65641
| | |||||| ||| | ||| | | | | | | ||||||||| |
Sbjct 3259 TTGAGGACAGCCCAGTCCCAAA--GGTCTGTAGGAGTTTT----GTTCCACATATCATAC 3206
Query 65642 TGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTG 65701
|| ||| | || || || || || | | | ||| | || || | |
Sbjct 3205 TGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCACCTTCTTTTTCT 3146
Query 65702 GCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTA 65761
|| | || ||| || | || | ||| || ||||||| || || || || || |||||
Sbjct 3145 GCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTA 3086
Query 65762 AGTTCACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGA 65821
|| ||| | || || ||||| || || | ||||| ||||| || || |||| |
Sbjct 3085 AGGAGTATTGCTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATA 3026
Query 65822 CCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACA 65881
|| ||||| ||||||||||| ||||| || | || ||| ||| | | || ||||| |||
Sbjct 3025 CCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACA 2966
Query 65882 GGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGT 65941
|| || | || | ||| || | || ||||| | ||||| | | ||| |
Sbjct 2965 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCT 2906
Query 65942 CGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTG 66001
|||| || ||| | |||| |||| | | | |||||| ||
Sbjct 2905 TTTAATT-TTTTAAAACTAAAT--------CGAT---TATT------TTCAACAAACATG 2864
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
||| || | || || |||||||| || || | || || | || || | |||
Sbjct 2863 TTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACA 2804
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
| || ||||| ||||| || || || ||||| | ||| | |||||||||||| |
Sbjct 2803 ACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTG 2744
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| |||||||| |||| ||| || || || || ||||| ||||| | || || ||
Sbjct 2743 TTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATA 2684
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCAC-CG---TACGTACCGCCCTACCTTTGCGTTCGTA 66237
| | ||| | | | || | || || || |||| ||| ||| |
Sbjct 2683 GACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAACCG-------TTTTTCTTCTTC 2631
Query 66238 ATGTT---CGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT 66294
|| || | || ||| |||||| || || | || | || | ||||| |
Sbjct 2630 ATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGGCCAGGACAATC 2571
Query 66295 GTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGG 66354
|| |||||||| || |||||| |||||| |||||| | |||||| ||||| ||
Sbjct 2570 ATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGG 2511
Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGC 66413
|||||| | || || || || || | |||| || || | || ||| || ||
Sbjct 2510 TATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTTT 2452
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
|| || | ||||||||| ||||| |||||||| || || | ||| || || || | |
Sbjct 2451 TTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTGCAAATGCAC 2392
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| ||||||| |||||||| || || || | || ||||||| | || | |||||
Sbjct 2391 CGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACA 2332
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || || || || || || ||||| ||||| | || || || | || | |
Sbjct 2331 TTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCCTGGGCTCTAA 2272
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCA 66653
| || || | ||| || |||||||| | || || || ||||| | |
Sbjct 2271 TGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATGCACATTGTTTTA 2212
Query 66654 CTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAA 66713
|| ||| || || |||||| || | || || | | ||| |||| || ||
Sbjct 2211 AAGTATCGAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAA 2152
Query 66714 GTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGC 66773
| || || ||||| || || ||||| || || || | || || ||||| || |
Sbjct 2151 GCTGTGGCCGCGGTGTAGCAGCTGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCT 2092
Query 66774 GAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG 66833
||||| ||| || || | ||| || |||||||| ||| ||||||||||| | ||
Sbjct 2091 CTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTA-TG 2033
Query 66834 CACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864
| | || ||| || | || |||||| | |||
Sbjct 2032 GAGACTCTCATAAGCATGTGTTGAGGTCTTTC 2001
>seq197295
Length=1118
Score = 143 bits (158), Expect = 2e-29
Identities = 144/187 (77%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 61190 AACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGA 61249
||||||| || |||||||| || || |||||||| ||||| || ||||| || |||||||
Sbjct 550 AACATTTTATCAAACATGTCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGA 609
Query 61250 ATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCT 61309
| || |||| |||||| |||| ||||| |||||| | || || | || ||||| || |
Sbjct 610 ACTTGGTGGAGCGTTTCTCGCAAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTT 669
Query 61310 TCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACA 61369
| || ||||| ||||| ||||| || |||||||||||| | | | || || || || |
Sbjct 670 TTCAAATTGCTATGGAAAATGTTCATTCGGAGATGTACTCTTTATTAATTGACACTTATA 729
Query 61370 TCAGGGA 61376
| |||||
Sbjct 730 TAAGGGA 736
>seq213871
Length=423
Score = 116 bits (128), Expect = 3e-21
Identities = 171/241 (71%), Gaps = 1/241 (0%)
Strand=Plus/Plus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
||||||||||| || ||||| |||| | ||| ||| || || ||||| || |
Sbjct 132 TTGTTCAATGCAATTGAGACTCTACCATGTATTAAGAAGAAGGCAGACTGGGCGTTACAG 191
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|||||| ||| | || || |||||||| ||||| | | || ||||||| ||| |||
Sbjct 192 TGGATCGGCAGCAAGACTGCCACATTTGGAGAACGTATTATCGCTTTTGCGGCGGTTGAG 251
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| |||||||| || ||||| |||| ||||||||||| ||||| || | |||
Sbjct 252 GGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGCTTGATG 311
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635
||||| | || ||||||||||| | || || | || || || ||| | || |||||
Sbjct 312 CCCGGATTAACTTTCAGCAATGAACTTATTTCTAGGGATGA-GGTATGATTAGTAATTTT 370
Query 61636 G 61636
|
Sbjct 371 G 371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396004043771360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |