Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq619 181 2e-43 seq92184 116 7e-24 seq92185 102 2e-19 seq67082 102 2e-19 >seq619 Length=4895 Score = 181 bits (200), Expect = 2e-43 Identities = 240/326 (74%), Gaps = 8/326 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | |||||||| ||| |||| || | | | Sbjct 2352 AGGGGAGTGAAATAGAACCTGAAACCGTGTGCCTACAACAAGTCAAAGCCC-GTTAATGG 2410 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| || || ||||||||||| Sbjct 2411 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGATTGCATGCGAGGTTAAG 2468 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGC 188 | || || ||||| || ||||||||| || || |||||| |||| || | Sbjct 2469 T--TGAAGAGACGG-AGCCGCAGCGAAAGCGAGTCTGAATAGGGCGTTTGAGTATGTAGT 2525 Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248 ||||| ||||||| ||||||||||||| | |||||||||| ||||||| || | Sbjct 2526 CGTAGACCCGAAACCATGTGATCTACCCATGTCCAGGTTGAAGGTGCGGTAAAACGCACT 2585 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||||||||||| |||||||||||| |||||| | |||||| || |||| Sbjct 2586 GGAGGACCGAACCCACGTACGTTGAAAAGTGCGGGGATGAGGTGTGGGTAGCGGAGAAAT 2645 Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334 |||| | |||| ||| |||||| || Sbjct 2646 TCCAAACGAACTTGGAGATAGCTGGT 2671 >seq92184 Length=875 Score = 116 bits (128), Expect = 7e-24 Identities = 158/213 (74%), Gaps = 12/213 (6%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||||| ||||| ||||||||| ||||| || || ||||| ||||||||| Sbjct 672 TACCCCGAG-AGGGGAGTGAAATAGTTTCTGAAACCATATGCTTACAACAAGTCGGAGCC 730 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAG 119 || | | ||||||||||||||||||| | |||||||| ||||||| || | || | Sbjct 731 C-GTTAATGGGTGACGGCGTGCCTTTTGTAGAATGAGCCGGCGAGTTA--CGATTACATG 787 Query 120 CGAGGTTAAGGGCTTCAG--GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 | |||||||| || | | | | ||||||||||||||||||||| || |||||| Sbjct 788 CAAGGTTAAG---TTGAAAAGACGG--AGCCGAAGTGAAAGCGAGCCTGAATAGGGCGTT 842 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGAT 210 ||| |||| ||||| ||||||| ||||| Sbjct 843 TAGTATGTGGTCGTAGACCCGAAACCAGGTGAT 875 >seq92185 Length=882 Score = 102 bits (112), Expect = 2e-19 Identities = 155/213 (73%), Gaps = 12/213 (6%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||||| ||||| ||||||||| |||| || || ||||| ||||||||| Sbjct 204 TACCCCGAG-AGGGGAGTGAAATAGTTTTTGAAACCATATGCTTACAACAAGTCGGAGCC 146 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAG 119 || | | |||||||||||||||||| | |||||||| ||||||| || | || | Sbjct 145 C-GTTAATGAGTGACGGCGTGCCTTTTGTAGAATGAGCCGGCGAGTTA--CGATTACATG 89 Query 120 CGAGGTTAAGGGCTTCAG--GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 | |||||||| || | | | | ||||||||||||||||||||| || |||||| Sbjct 88 CAAGGTTAAG---TTAAAAAGACGG--AGCCGAAGTGAAAGCGAGCCTGAATAGGGCGTT 34 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGAT 210 ||| ||| ||||| ||||||| ||||| Sbjct 33 TAGTATGTGATCGTAGACCCGAAACCAGGTGAT 1 >seq67082 Length=1256 Score = 102 bits (112), Expect = 2e-19 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| |||||||||||||| ||||| | |||| Sbjct 4 TAGACCCGAAACCAGGTGATCTAGCCATGAGCAGGTTGAAGTTAATGTAACAGTTAATGG 63 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||| |||||||| | || ||| ||||||| | Sbjct 64 AGGACCGAACCAACGTTCGTTGAAAAGACCGTGGATGACTTGTGGCTAGCGGTGAAATTC 123 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 ||||| ||| ||| |||||| || Sbjct 124 CAATCGAACCTGGAGATAGCTGGT 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971242702848