Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq619 358 2e-96 seq620 201 3e-49 >seq619 Length=4895 Score = 358 bits (396), Expect = 2e-96 Identities = 319/397 (80%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 516 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCG 575 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 || ||| ||||||||||||| |||||||||||| |||| | | ||||||| |||| || Sbjct 576 GATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTCTTAAGTCTGATGTGAAAGCCCCCGG 635 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || |||| |||| |||| | |||| |||| ||||| ||||| | ||||||| Sbjct 636 CTCAACCGGGGAGGGTCATTGGAAACTGGGAGACTTGAGTGCAGAAGAGGAGAGTGGAAT 695 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||| || | Sbjct 696 TCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCAGTGGCGAAGGCGGCTC 755 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| | ||||||||| | || |||||||||||||||||||||||||||||||||| Sbjct 756 TCTGGTCTGTAACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 815 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG-GGATTTACTTCCTT-GGTAA 372 |||||||||||||| |||||||| ||| |||||| || ||| | |||| || Sbjct 816 TGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTGGAGGGTTTCCGCCCTTCAGTGC 875 Query 373 CGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||| | ||| ||||||||||| ||| Sbjct 876 TGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTAC 912 >seq620 Length=1424 Score = 201 bits (222), Expect = 3e-49 Identities = 208/271 (77%), Gaps = 1/271 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| | | |||| |||||||||| |||||||||||||||||||||| |||| | Sbjct 1154 ATACCTTACCAGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGG 1095 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||||||| |||| ||| ||||||||||||||||| || ||||| || ||| | | | Sbjct 1094 CAAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGG 1035 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 | |||| ||||| ||||| || || || | ||| || |||||||| | || Sbjct 1034 TTAAATTTAGGGGCTCAACCT-CTAACCGCCTTGGAAACTACATTACTAGAGTATAGGAG 976 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| |||||||| || ||||||| ||| ||||||||||||| || |||||||||| || Sbjct 975 AGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTG 916 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACG 272 |||||||| || |||| || ||||||| Sbjct 915 GCGAAGGCGGCTAACTGGCCTATTACTGACG 885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287535556736