Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq619 178 2e-42 seq67082 105 9e-21 >seq619 Length=4895 Score = 178 bits (196), Expect = 2e-42 Identities = 188/248 (76%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| || ||||| | || ||| Sbjct 3692 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACTTCATCTTACGATTTT-GCAG 3634 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||||| |||||| ||||| ||| | Sbjct 3633 AGACCTGTGTTTTTGATAAACAGTCGCTTGGGCCTATTCACTGCG----------GCTGA 3584 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | || ||| |||||||||||||||||||||||||| ||||||||||| Sbjct 3583 TCT-GACGATCA---------GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 3534 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||||| | ||||| | || | |||||| ||||||| | ||| |||||||||||| Sbjct 3533 TTCCTTAACGAGAGTTCTCTCGCTCACCTTAGGATTCTCTCCTCGACTACCTGTGTCGGT 3474 Query 241 TTACGGTA 248 || ||||| Sbjct 3473 TTGCGGTA 3466 >seq67082 Length=1256 Score = 105 bits (116), Expect = 9e-21 Identities = 173/248 (70%), Gaps = 25/248 (10%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||| |||||||||||| || ||||||||| |||| || ||| ||| Sbjct 1176 TTAACCTTCCAGCACTGGGCAGGCGTCACCCCCTATACATCGTCTTA-CGACTTAGCAGA 1118 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 || |||||||||| ||||||| | | |||| ||| |||||| |||| Sbjct 1117 GAGCTGTGTTTTTGCTAAACAGGCCCGGACCTC--TTCACTGCGA----------CTCA- 1071 Query 122 CACGTCGTTCACCAGCAGTG-GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | || || || ||||||||| | || |||||||| ||||||| || Sbjct 1070 ----TATT------GCTATGAGCTCCCCTTCTCGCTAACTTACGGGGTTATTTTGCAGAG 1021 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | | |||| | || ||||||| || ||| | ||||||| |||||| || Sbjct 1020 TTCCTTAGCTATAGTTATCTCGCTTGCCTTAGGATATTCTCCTTGACCACGTGTGTCCGT 961 Query 241 TTACGGTA 248 | ||||| Sbjct 960 TCTCGGTA 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693323114932