Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq619 114 1e-23 seq67082 78.8 1e-12 >seq619 Length=4895 Score = 114 bits (126), Expect = 1e-23 Identities = 133/176 (76%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||||| | || || |||||| | ||| ||| || || || Sbjct 3469 CGCAAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGAGCGAGAGAACTCTCG-TT 3527 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| |||||| |||||||||||| || |||| | | | | || Sbjct 3528 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTGATCGTCAGAT--- 3584 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||||||| ||| || |||||||| |||||||||||| || ||| || Sbjct 3585 CAGCCGCAGTGAATAGGCCCAAGCGACTGTTTATCAAAAACACAGGTCTCTGCAAA 3640 >seq67082 Length=1256 Score = 78.8 bits (86), Expect = 1e-12 Identities = 122/171 (71%), Gaps = 5/171 (3%) Strand=Plus/Plus Query 26 AACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGA 85 ||||||||||||| ||| | |||||| ||||||| ||| || | | |||||| Sbjct 960 AACGGACACACGTGGTCAAGGAGAATATCCTAAGGCAAGCGAGATAACTATAGCTAAGGA 1019 Query 86 ACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGC 145 ||| ||||| | |||| |||| || | || || ||| | | || ||| || | | Sbjct 1020 ACTCTGCAAAATAACCCCGTAAGTTAGCGAGAAGGGGAGC--TCATAGCAATATGA-GTC 1076 Query 146 GCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 |||| ||| |||||| ||| ||||||| ||||||||||| || ||| || Sbjct 1077 GCAGTGAAGAGGTCCGGGC--CTGTTTAGCAAAAACACAGCTCTCTGCTAA 1125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530376207736