Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq619 675 0.0 seq620 520 3e-145 >seq619 Length=4895 Score = 675 bits (748), Expect = 0.0 Identities = 449/496 (91%), Gaps = 2/496 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 910 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 969 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| Sbjct 970 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCTTTGACCACTC 1029 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||||||||||| || |||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 1030 TAGAGATAGAGCTT-CCCCTTCGGGGG-CAAAGTGACAGGTGGTGCATGGTTGTCGTCAG 1087 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1088 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTGC 1147 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1148 CATCATTTAGTTGGGCACTCTAGCAAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1207 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| Sbjct 1208 GACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGGAAGTAC 1267 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 || | | ||||| ||||||| |||| |||| | ||||| | ||||||||||||||| Sbjct 1268 AACGAGTCGCGAAGTCGCGAGGCTAAGCTAATCTCTTAAAGCTTCTCTCAGTTCGGATTG 1327 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 ||| |||||||||| ||| ||||||| ||||||||||||||||| |||||||| || | Sbjct 1328 TAGGCTGCAACTCGCCTACATGAAGCCGGAATCGCTAGTAATCGCGGATCAGCACGCCGC 1387 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1388 GGTGAATACGTTCCCG 1403 >seq620 Length=1424 Score = 520 bits (576), Expect = 3e-145 Identities = 415/495 (84%), Gaps = 16/495 (3%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 662 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC--CTCTAGA 124 |||||||||||||||||||||||||||||| ||||||||| ||| | || |||| Sbjct 661 TAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATA-TCTTGCGAAGCTATAGA 603 Query 125 GATAGAGGTTTCCCCTTCGGGGG--ACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCT 182 |||| || | | || ||| | ||||||| ||||||||||||||||| | Sbjct 602 GATATAG---------TAGAGGTTAACAAGGATACAGGTGGTGCATGGTTGTCGTCAGTT 552 Query 183 CGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242 |||||||||||||||| |||||||| | ||||||| |||||||||| ||||||||||| Sbjct 551 CGTGTCGTGAGATGTTTGGTTAAGTTCAGCAACGAACGCAACCCTTGTCCTTAGTTGCCA 492 Query 243 TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGA 302 |||||||||||| |||||||| |||||| ||| || | ||||||||||||||||| Sbjct 491 GCATTAAGTTGGGGACTCTAAGGAGACTGCTAGTGT-AAGCTAGAGGAAGGTGGGGACGA 433 Query 303 CGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAA 362 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 432 CGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGTTGATACAA 373 Query 363 AGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTA 422 || | || |||||||||||||||||||||| || ||||| ||||||| ||||||| | Sbjct 372 AGAGTCGCTAAACCGCGAGGTCAAGCAAATCTCAAAAAGTCAGTCTCAGTCCGGATTGAA 313 Query 423 GTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACG 481 ||||||||||||||| |||||| ||||||||||||||||| |||||| ||| || Sbjct 312 GTCTGCAACTCGACTTCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCAATGTCGCG 253 Query 482 GTGAATACGTTCCCG 496 |||||||||||| || Sbjct 252 GTGAATACGTTCTCG 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501592336640