Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq350 351 2e-94 seq158491 147 4e-33 seq619 82.4 1e-13 >seq350 Length=11499 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| | |||||||||||||||||||||||||||| Sbjct 10353 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 10294 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 10293 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 10234 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10233 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 10174 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 10173 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 10115 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 10114 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 10074 >seq158491 Length=350 Score = 147 bits (162), Expect = 4e-33 Identities = 129/158 (82%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT---ACCGAATTCTGCTTCGGTA 134 |||||||||| |||| |||||||||||||||| ||| | | || | || || | Sbjct 1 CTCACGTTCCTCATTACCGGGTGAACAATCCAACACTTCGTAACATATACA-CTACG--A 57 Query 135 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 |||| |||||| ||||||||||| ||||||||||| |||||||||| |||| | |||| Sbjct 58 TGATCAGAAGAGACGACATCGAAGAATCAAAAAGCAGAGTCGCTATGATCGCTCGCCTGC 117 Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 |||||||||||||||||||||||||||||| | |||| Sbjct 118 TACAAGCCAGTTATCCCTGTGGTAACTTTTCCGTCACC 155 >seq619 Length=4895 Score = 82.4 bits (90), Expect = 1e-13 Identities = 124/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 4440 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 4381 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| | Sbjct 4380 CTTGGGACCGACTACAGCCCCAGGATGC---GACGAGCCGACATCGAGGTGCCAAACCTC 4324 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | || || ||||| | | ||||| |||||||| |||| ||||| Sbjct 4323 CCCGTCGATGTGGACTCTTGGGGGAGATAAGCCTGTTATCCCCAGGGTAGCTTTT 4269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853032242304