Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq619 311 2e-82 seq20498 282 8e-74 seq20497 264 2e-68 >seq619 Length=4895 Score = 311 bits (344), Expect = 2e-82 Identities = 258/312 (83%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACC 89 |||| ||| | | |||| ||||| |||||||||||||||| ||| | ||||||| Sbjct 3979 ACGCTAGTTTCGATGGAGGCGCTGGTGGGATACTACCCCTGCGTTATGGCCACTCTAACC 4038 Query 90 GG-ACGACGTATAACCGTTGACGG-GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTC 147 | || || ||| ||| | || ||||||||||| |||||||||||||||||||||| Sbjct 4039 CGCACCAC---TAATCGTGGTGGGAGACAGTGTCAGATGGGCAGTTTGACTGGGGCGGTC 4095 Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||| |||||||||||||||||||||||| | ||||||| ||| |||||| ||| || Sbjct 4096 GCCTCCTAAAGAGTAACGGAGGCGCCCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCG 4155 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 | |||| ||||||| ||||| | |||||||||| ||| |||||| ||||||||||||| Sbjct 4156 AAGAGTGTAAAGGCAGAAGGGAGCTTGACTGCGAGACCTACAAGTCGAGCAGGGACGAAA 4215 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 |||||||||| |||||||| ||| | | |||||| |||| |||||| ||||||||||||| Sbjct 4216 GTCGGGCTTAGTGATCCGGTGGTTCCGCATGGAAGGGCCATCGCTCAACGGATAAAAGCT 4275 Query 328 ACCCTGGGGATA 339 |||||||||||| Sbjct 4276 ACCCTGGGGATA 4287 >seq20498 Length=630 Score = 282 bits (312), Expect = 8e-74 Identities = 257/320 (80%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGA 80 || ||| | |||| |||| || |||| | ||||||||| |||| || | ||||| | Sbjct 222 GATATGCAGACGCTAGTAGGCATGGAGTCATCATTGGGATACCACCCTTGCTATATTGAA 281 Query 81 TTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTG 139 ||||||| || ||| |||| | | | |||||||||| | ||| |||||||||| Sbjct 282 ATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGTCTGGTGGGTAGTTTGACTG 339 Query 140 GGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAA 199 |||||||||||||| ||| |||||||||||||||||||| |||||||| || |||||| Sbjct 340 GGGCGGTCGCCTCCTAAAAAGTAACGGAGGCGCCCAAAGGTACCCTCAATATGAATGGAA 399 Query 200 ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAG 259 | ||| | | || ||||||| ||||||||| |||||||||| || |||||| ||||| Sbjct 400 ATCATATGTAGAGCGCAAAGGTAAAAGGGTGCTTGACTGCGAGACATACAAGTCGAGCAG 459 Query 260 GGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGA 319 | |||||||| ||||||| |||||||||||||||| ||||| ||||||||||| ||||| Sbjct 460 GAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCTGTGTGGAAAGGCCGTCGCTCAACGGA 519 Query 320 TAAAAGCTACCCTGGGGATA 339 |||||| ||||| ||||||| Sbjct 520 TAAAAGTTACCCCGGGGATA 539 >seq20497 Length=631 Score = 264 bits (292), Expect = 2e-68 Identities = 256/323 (79%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 21 GAGATGGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCT-GTTGTATTGG 79 || ||| | |||| |||| || |||| | | ||||||||| |||||| | | ||||| Sbjct 220 GATATGCAGACGCTAGTAGGCATGGAGTCACCATTGGGATACCACCCCTTGCTATATTGA 279 Query 80 ATTTCTAACCGGACGACGTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACT 138 | ||||||| || ||| |||| | | | |||||||||| | ||| ||||||||| Sbjct 280 AATTCTAACTTGA-GACC-ATAATCTGGTCTAAGGACAGTGTCTGGTGGGTAGTTTGACT 337 Query 139 GGGG--CGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATG 196 |||| || |||||||| ||| |||||||||||||||||||| |||||||| || ||| Sbjct 338 GGGGGGCGATCGCCTCCTAAAAAGTAACGGAGGCGCCCAAAGGTACCCTCAATATGAATG 397 Query 197 GAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAG 256 |||| ||| | | || ||||||| ||||| ||| |||||||||| || |||||| || Sbjct 398 GAAATCATATGTAGAGCGCAAAGGTAAAAGAGTGCTTGACTGCGAGACATACAAGTCGAG 457 Query 257 CAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGAC 316 |||| |||||||| ||||||| |||||||||||||||| ||||| ||||||||||| || Sbjct 458 CAGGAACGAAAGTTGGGCTTAGTGATCCGGCGGTGCTGTGTGGAAAGGCCGTCGCTCAAC 517 Query 317 GGATAAAAGCTACCCTGGGGATA 339 ||||||||| ||||| | ||||| Sbjct 518 GGATAAAAGTTACCCCGAGGATA 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980827334784