Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq619 156 5e-36 seq20498 122 1e-25 seq20497 114 1e-23 >seq619 Length=4895 Score = 156 bits (172), Expect = 5e-36 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| ||||| |||||||||| | |||||||||| | ||||| |||||||| || Sbjct 3903 GGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTAAAATTTCACCGA 3844 Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | ||| || ||||||||| ||| || ||||||| ||||||||||||||| Sbjct 3843 GTCTCTCG-TTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCC 3785 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3784 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 3725 >seq20498 Length=630 Score = 122 bits (134), Expect = 1e-25 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||| |||||| |||| ||||||||||| | |||||||||| | ||||| ||||||| | Sbjct 156 CGGAGTCTTTCCGTCTAATCGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCG 97 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | ||||||| ||| || ||||||| |||| ||||||||| Sbjct 96 AGTCTATAGCCGAGACAGCGTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCT 37 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||| ||||||||||||||||||||||||| Sbjct 36 GACAATGAATTTCGCTACCTTAGGACCGTTA 6 >seq20497 Length=631 Score = 114 bits (126), Expect = 1e-23 Identities = 115/152 (76%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||||||||||| | |||||||||| | ||||| ||||||| | Sbjct 157 CGGGGTCTTTCCGTCTAATCGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCG 98 Query 83 AGCTCACGGTTGAGACAG-NNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || | | ||||||| ||| || ||||||| |||| ||||||||| Sbjct 97 AGTCTATAGCCGAGACAGCGTCCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACC 38 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||| ||||| |||||||||||||||||| Sbjct 37 TGACAAGCAATTTTGCTACCTTAGGACCGTTA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546351394716