Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq619 356 8e-96 seq92184 159 1e-36 seq92185 143 1e-31 seq67082 127 7e-27 >seq619 Length=4895 Score = 356 bits (394), Expect = 8e-96 Identities = 444/600 (74%), Gaps = 20/600 (3%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||| ||| |||| || | | |||||| || ||| | | | | | |||||||| Sbjct 2834 TCGACTATGGATCTTA-TCACTCACAGTCTGACTCCCG-GATATGAATGAATGGCATTCG 2777 Query 61 GAGTTTGGTTGATTTCGGTAAGCTT-GTGGGCCCCCTAGACCATCCAGTGCTCTACCTCC 119 |||||| ||| |||||||| | | || ||||||| ||| ||||||||||||||| Sbjct 2776 GAGTTTATCTGAATTCGGTAACCCGAGATGGGCCCCTAGTCCAAACAGTGCTCTACCTCC 2717 Query 120 GGGAAGA--AACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGA 177 | || | ||| ||| |||||| ||||||| |||||||||||||| | | Sbjct 2716 ATCATTCTCAATTC-CGAGGCTAGCCCTAAAGCTATTTCGGAGAGAACCAGCTATCTCCA 2658 Query 178 AGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGG 237 |||| | |||| |||| || ||| ||||| |||||||| || |||||||| || |||| Sbjct 2657 AGTTCGTTTGGAATTTCTCCGCTACCCACACCTCATCCCCGCACTTTTCAACGTACGTGG 2598 Query 238 GTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGC 297 ||||||||||||| || ||||| |||||||||| ||||| |||||||| | | Sbjct 2597 GTTCGGTCCTCCAGTGCGTTTTACCGCACCTTCAACCTGGACATGGGTAGATCACATGGT 2538 Query 298 TTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||||| | ||||| ||||||||||| |||||||||||||| ||||| | Sbjct 2537 TTCGGGTCTACGACTACATACTCAAACGCCCTATTCAGACTCGCTTTCGCTGCGGCTCCG 2478 Query 358 CCAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCAC 416 | | | |||||||||| | ||| ||||||| || ||||||| |||||||||| Sbjct 2477 TCTCTTCAACTTAACCTCGC-ATGCAATCGTAACTCGCCGGTTCATTCTACAAAAGGCAC 2419 Query 417 GCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCA 476 ||| ||||| | | || || ||| ||| ||||||||||| ||||||| Sbjct 2418 GCCATCACC-----CATTAACGG-------GCTTTGACTTGTTGTAGGCACACGGTTTCA 2371 Query 477 GGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536 ||| |||||||||||||| | ||||| ||||||||||||||||||||||||| || | | Sbjct 2370 GGTTCTATTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCAC 2311 Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATT 596 |||||||||| | ||||||||||| ||| | |||||| || ||||| ||| |||| Sbjct 2310 TATCGGTCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCGGATTCCGACGGAATT 2251 >seq92184 Length=875 Score = 159 bits (176), Expect = 1e-36 Identities = 183/244 (75%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 323 ACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACCTCGCGACAC 381 ||||||||||| | ||||||||| || ||||| | | | ||||||| || | Sbjct 841 ACGCCCTATTCAGGCTCGCTTTCACTTCGGCTCCGTCTTTTCAACTTAACCTTGC-ATGT 783 Query 382 AACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCA 441 || ||||||| |||||||||| ||||||||||||||||||| | | || || Sbjct 782 AATCGTAACTCGCCGGCTCATTCTACAAAAGGCACGCCGTCACC-----CATTAACGG-- 730 Query 442 CTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGG 501 |||||||| ||||| ||| |||||||||| ||||||||||||||| | ||| Sbjct 729 -----GCTCCGACTTGTTGTAAGCATATGGTTTCAGAAACTATTTCACTCCCCTCTCGGG 675 Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561 |||||||||||||||||||||||||||| || | |||||||| | ||||||||| Sbjct 674 GTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTAATTGGTTAGTATTTAGC 615 Query 562 CTTA 565 |||| Sbjct 614 CTTA 611 >seq92185 Length=882 Score = 143 bits (158), Expect = 1e-31 Identities = 181/247 (73%), Gaps = 20/247 (8%) Strand=Plus/Plus Query 323 ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC----ACGGGTTAACCTCGCGA 378 ||||||||||| | ||||||||| || ||||| | | || ||||||| || Sbjct 35 ACGCCCTATTCAGGCTCGCTTTCACTTCGGCTCCGTCTTTTTAAC---TTAACCTTGCAT 91 Query 379 CACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAG 438 | || || ||||| |||||||||| |||||||||||||||||| | | || | Sbjct 92 GTAATCGTAA-CTCGCCGGCTCATTCTACAAAAGGCACGCCGTCACT-----CATTAACG 145 Query 439 GCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA 498 | |||||||| ||||| ||| ||||||||| ||||||||||||||| | Sbjct 146 G-------GCTCCGACTTGTTGTAAGCATATGGTTTCAAAAACTATTTCACTCCCCTCTC 198 Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 ||||||||||||||||||||||||||||||| | | |||||||| | ||||||| Sbjct 199 GGGGTACTTTTCACCTTTCCCTCACGGTACTGATTCACTATCGGTAATTGGTTAGTATTT 258 Query 559 AGGCTTA 565 || |||| Sbjct 259 AGCCTTA 265 >seq67082 Length=1256 Score = 127 bits (140), Expect = 7e-27 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||||||||||||||||||| | | ||| |||||| ||| Sbjct 177 GACGCTAGTCCTAAAACTATATCGGGGAGAACCAGCTATCTCCAGGTTCGATTGGAATTT 118 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| ||| ||||| ||||||| | |||||||| | || |||||||||||||| Sbjct 117 CACCGCTAGCCACAAGTCATCCACGGTCTTTTCAACGAACGTTGGTTCGGTCCTCCATTA 58 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT 306 | |||| ||||||||||| ||||| |||||||| | | ||||||||| Sbjct 57 ACTGTTACATTAACTTCAACCTGCTCATGGCTAGATCACCTGGTTTCGGGTCT 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814690313216