Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq619 246 8e-63 seq92184 206 7e-51 seq92185 187 6e-45 seq350 80.6 7e-13 >seq619 Length=4895 Score = 246 bits (272), Expect = 8e-63 Identities = 300/394 (76%), Gaps = 15/394 (4%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || |||||||||||||||| || ||||| ||||| ||||||| | Sbjct 2613 TTTTCAACGTACGTGGGTTCGGTCCTCCAGTGCGTT-TTACCGCACCTT-CAACCTGGAC 2556 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACT-AGACGCCCTAGTAAGA 148 || || |||||| | ||||| |||||||| | | ||| | |||||||| | ||| Sbjct 2555 ATGGG-TAGATCACATGGTTT-CGGGTCTACGACT-ACATACTCAAACGCCCTATTCAGA 2499 Query 149 CTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAA--TAAGTCG 205 |||||||| |||| || |||| || ||| | | | | || || || ||| ||| Sbjct 2498 CTCGCTTT-CGCTGCGGCTCCGTCTCTTCAACTTAACCTCGCA--TGCAATCGTAACTCG 2442 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 | | |||| ||||||||| |||| ||||||| || | |||| ||| ||||| Sbjct 2441 CCGGTTCATTCTACAAAAGGCACGCCATCACCCATTAACG--GGCTTTGACTTGTTGTAG 2384 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCA 325 ||| ||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||| Sbjct 2383 GCACACGGTTTCAGGTTCTATTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCA 2325 Query 326 CGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 ||||||| ||||||||||||||| | | ||||||||||||||| |||||||| ||| Sbjct 2324 CGGTACTGGTTCACTATCGGTCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCGG 2265 Query 386 ATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||| ||| | || |||||| |||| | ||||| Sbjct 2264 ATTCCGACGGAATTCCTCGTGTTCCGCCGTACTC 2231 >seq92184 Length=875 Score = 206 bits (228), Expect = 7e-51 Identities = 246/324 (76%), Gaps = 11/324 (3%) Strand=Plus/Minus Query 99 ATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTC 158 ||| || ||||| |||||||| || | |||| |||||||| | || |||||||| | Sbjct 875 ATCACCTGGTTT-CGGGTCTACGACC-ACATACTAAACGCCCTATTCAGGCTCGCTTT-C 819 Query 159 GCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTAT 217 || || |||| || ||| | | | |||| | | ||| |||| | | |||| | Sbjct 818 ACTTCGGCTCCGTCTTTTCAACTTAACCTTGCATGTAATCGTAACTCGCCGGCTCATTCT 759 Query 218 ACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTC 277 |||||||| |||| |||||||| || | |||||| ||| ||||| ||||| |||||| Sbjct 758 ACAAAAGGCACGCCGTCACCCATTAACG--GGCTCCGACTTGTTGTAAGCATATGGTTTC 701 Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 || | |||||||||||||||||| ||||| |||||| |||||||||||||||||| |||| Sbjct 700 AGAAACTATTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTC 642 Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCATATTCAGACAA 395 ||||||||| | | |||||||||||||| | || ||||| | || |||| ||||| Sbjct 641 ACTATCGGTAATTGGTTAGTATTTAGCCTTACGCAG--TGGTCTGCGCAAATTCCGACAA 584 Query 396 AGTTTCTCGTGCTCCGTCCTACTC 419 ||| | ||||| |||| ||||| Sbjct 583 GGTTCCACGTGCCTCGTCGTACTC 560 >seq92185 Length=882 Score = 187 bits (206), Expect = 6e-45 Identities = 244/326 (75%), Gaps = 15/326 (5%) Strand=Plus/Plus Query 99 ATCGCCCGGTTTTCGGGTCTATT-TCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTT 157 ||| || ||||| |||||||| || || |||| |||||||| | || |||||||| Sbjct 1 ATCACCTGGTTT-CGGGTCTACGATCACAT--ACTAAACGCCCTATTCAGGCTCGCTTT- 56 Query 158 CGCTACGCCTCC--CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATT 215 | || || |||| | | || |||| ||| || | | ||| |||| | | |||| Sbjct 57 CACTTCGGCTCCGTCTTTTTAACTTAACCTT-GCATGTAATCGTAACTCGCCGGCTCATT 115 Query 216 ATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTT 275 ||||||||| |||| ||||| || || | |||||| ||| ||||| ||||| |||| Sbjct 116 CTACAAAAGGCACGCCGTCACTCATTAACG--GGCTCCGACTTGTTGTAAGCATATGGTT 173 Query 276 TCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGT 335 ||| | |||||||||||||||||| ||||| |||||| |||||||||||||||||| | Sbjct 174 TCAAAAACTATTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACGGTACTGAT 232 Query 336 TCACTATCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCATATTCAGAC 393 ||||||||||| | | |||||||||||||| | || ||||| | || |||| ||| Sbjct 233 TCACTATCGGTAATTGGTTAGTATTTAGCCTTACGCAG--TGGTCTGCGCAAATTCCGAC 290 Query 394 AAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||| | ||||| || | ||||| Sbjct 291 AAGGTTCCACGTGCCTCGCCGTACTC 316 >seq350 Length=11499 Score = 80.6 bits (88), Expect = 7e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 7139 ACGGTTTCACGTACTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 7081 Query 330 ACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| |||| ||||||||| | ||| ||||||||||| || Sbjct 7080 ACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTAGA 7040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239612397056