Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq619 210 4e-52 seq620 170 4e-40 seq57234 93.3 8e-17 seq137371 89.7 1e-15 >seq619 Length=4895 Score = 210 bits (232), Expect = 4e-52 Identities = 235/313 (75%), Gaps = 11/313 (4%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| |||| |||| |||||| || || ||| ||||||||||||||||| Sbjct 419 GGCGTTGCTCGGTCAGACTTTCGTCCATTGCCGAAGATTCCCTACTGCTGCCTCCCGTAG 360 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||| ||||||||||||||||||||||||||||| ||| |||||||| |||||| || Sbjct 359 GAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGATCACCCTCTCAGGTCGGCTATGCAT 300 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | ||||||| || ||| ||||||||||| ||||| ||||| | ||||| ||| Sbjct 299 CGTGGCCTTGGTGAGCCGTTACCTCACCAACTAGCTAATGCACCGCGGGTCCATCCATCA 240 Query 181 GCG-----ATAAATCTTTGGTCAAAGAATGATGCCATCC----TCTGACATTATGCGGTA 231 ||| |||| | |||| || || |||| | || |||| ||||| Sbjct 239 GCGGCACCGTAAAGCGCCTTTCAA--AACGAAACCATGCGGTTTCGATTGTTATACGGTA 182 Query 232 TTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCA 291 ||||| |||||||| ||||| || ||||| |||||||| | ||||||||||||| Sbjct 181 TTAGCACCTGTTTCCAAGTGTTATCCCCTTCTGATGGGCAGGTTACCCACGTGTTACTCA 122 Query 292 CCCGTCCGCCACT 304 ||||| ||||||| Sbjct 121 CCCGTTCGCCACT 109 >seq620 Length=1424 Score = 170 bits (188), Expect = 4e-40 Identities = 148/184 (80%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| |||| ||||||||| || || || |||||||||| |||||| Sbjct 1239 GGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTTCCTACTGCTGCCTTCCGTAG 1298 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| || Sbjct 1299 AAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGATCGGCTACGCAT 1358 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| |||||| || |||| || |||||||| |||| ||||| |||||| | | Sbjct 1359 CGTTACCTTGGTAAGCCATTACCTTACCAACTAGTTAATGCGCCGCATCCCCATCAATTA 1418 Query 181 GCGA 184 |||| Sbjct 1419 GCGA 1422 >seq57234 Length=9981 Score = 93.3 bits (102), Expect = 8e-17 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 |||||||||||||| ||||||||||| |||||||| | || || || ||||| ||| Sbjct 65 TATGCGGTATTAGCTGTCGTTTCCAAAAGTTATTCCCCACTAAATGGTAGGTTAGATACG 124 Query 283 TGTTACTCACCCGTCCGCCACTAA 306 |||||||||||||| ||||||||| Sbjct 125 TGTTACTCACCCGTTCGCCACTAA 148 >seq137371 Length=278 Score = 89.7 bits (98), Expect = 1e-15 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 |||||||||||||| |||||||||| |||||||| | || || || ||||| ||| Sbjct 214 TATGCGGTATTAGCTGTCGTTTCCAACAGTTATTCCTCACTAAATGGTAGGTTAGATACG 155 Query 283 TGTTACTCACCCGTCCGCCACTAA 306 |||||||||||||| ||||||||| Sbjct 154 TGTTACTCACCCGTTCGCCACTAA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996801721344