Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq619 140 3e-31 seq620 136 3e-30 >seq619 Length=4895 Score = 140 bits (154), Expect = 3e-31 Identities = 127/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| || | |||| | |||||||| ||||||| Sbjct 1341 CGAGTTGCAGCCTACAATCCGAACTGAGAGAAGCTTTAAGAGATTAGCTTAGCCTCGCGA 1282 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 || ||| | | |||| | |||||||| ||||||| ||||| |||||||| ||| Sbjct 1281 CTTCGCGACTCGTTGTACTTCCCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCAT 1222 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || || |||||||||||||||||||||||||||||||||| Sbjct 1221 GATGATTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 1182 >seq620 Length=1424 Score = 136 bits (150), Expect = 3e-30 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||| || ||||| || |||| ||| ||||||| Sbjct 300 TCGAGTTGCAGACTTCAATCCGGACTGAGACTGACTTTTTGAGATTTGCTTGACCTCGCG 359 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || ||| | || ||||| ||||||||| ||||||| ||||| |||||||| || Sbjct 360 GTTTAGCGACTCTTTGTATCAACCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCA 419 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || |||||||| |||||||||||||| Sbjct 420 TGATGATTTGACGTCGTCCCCACCTTCCTC 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415354861480